Scientific Publications since 2002

Journal Article

Brazel, A. J.; Manoj, N.S.; Turck, F.; Ó’Maoiléidigh, D.S.: Measuring CO2 assimilation of Arabidopsis thaliana whole plants and seedlings. Plant Science 350 (January), 112295 (2025)

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Calabria, J.; Wang, L.; Rast-Somssich, M. I.; Chen, H.-W.; Watt, M.; Persson, S.; Andersen, T. G.; Idnurm, A.; Somssich, M.: Resolving spatially distinct phytohormone response zones in Arabidopsis thaliana roots colonized by Fusarium oxysporum. Journal of Experimental Botany, erae516 (2025)

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Chesneau, G.; Herpell, J.; Garrido Oter, R.; Hacquard, S.: From synthetic communities to synthetic ecosystems: exploring causalities in plant-microbe-environment interactions. New Phytologist 245 (2), pp. 496 - 502 (2025)

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Kraege, A.; Chavarro-Carrero, E.; Schnell, E.; Heilmann-Heimbach, S.; Becker, K.; Koehrer, K.; Huettel, B.; Sargheini, N.; Schiffer, P.; Waldvogel, A.-M. et al.; Thomma, B. P. H. J.; Rovenich, H.: High quality genome assembly and annotation (v1) of the eukaryotic freshwater microalga Coccomyxa elongata SAG 216-3b. G3-Genes - Genomes - Genetics 15 (2), jkae294 (2025)

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Kramer, J.; Zuebert, C.; Huettel, B.; Kube, M.; Hoelzle, L. E.: The complete genome of Mycoplasmoides cavipharyngis strain 117C, a close relative of hemotrophic mycoplasma. Microbiology Resource Announcements, e00556-24 (2025)

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Leng, Y.; Kümmel, F.; Zhao, M.; Molnár, I.; Doležel, J.; Logemann, E.; Koechner, P.; Xi, P.; Yang, S.; Moscou, M. J. et al.; Fiedler, J. D.; Du, Y.; Steuernagel, B.; Meinhardt, S.; Steffenson, B. J.; Schulze-Lefert, P.; Zhong, S.: A barley MLA immune receptor is activated by a fungal nonribosomal peptide effector for disease susceptibility. New Phytologist 245, pp. 1197 - 1215 (2025)

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Mozer, A.; Di-Nizo, C. B.; Consul, A.; Huettel, B.; Jaeger, R.; Akintayo, A.; Erhardt, C.; Fenner, L.; Fischer, D.; Forat, S. et al.; Gimnich, F.; Grobe, P.; Martin, S.; Nathan, V.; Saeed, A.; von Der Mark, L.; Woehle, C.; Olek, K.; Misof, B.; Astrin, J. J.: FOGS: A SNPSTR Marker Database to Combat Wildlife Trafficking and a Cell Culture Bank for Ex-Situ Conservation. Molecular Ecology Resources, e14062 (2025)

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Oliveri, H.; Cheddadi, I.: Hydromechanical field theory of plant morphogenesis. Journal of the Mechanics and Physics of Solids 196, 106035 (2025)

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Ordon, J.; Logemann, E.; Maier, L.-P.; Lee, T.; Dahms, E.; Oosterwijk, A.; Flores-Uribe, J.; Miyauchi, S.; Paoli, L.; Stolze, S. C. et al.; Nakagami, H.; Felix, G.; Garrido-Oter, R.; Ma, K.-W.; Schulze-Lefert, P.: Conserved immunomodulation and variation in host association by Xanthomonadales commensals in Arabidopsis root microbiota. Nature Plants (2025)

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Parker, M. T.; Fica, S. M.; Simpson, G. G.: RNA splicing: a split consensus reveals two major 5′ splice site classes. Open Biology 15 (1), 240293 (2025)

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Steckenborn, S.; Marques, A.: Centromere diversity and its evolutionary impacts on plant karyotypes and plant reproduction. New Phytologist 245, pp. 1879 - 1886 (2025)

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Toth, R.; Huettel, B.; Eini, O.; Varrelmann, M.; Kube, M.: The complete genome sequence of the stolbur pathogen "Candidatus14 (1), e0064024 (2025)

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Armistead, J.; Hoepfl, S.; Goldhausen, P.; Mueller-Hartmann, A.; Fahle, E.; Hatzold, J.; Franzen, R.; Brodesser, S.; Radde, N. E.; Hammerschmidt, M.: A sphingolipid rheostat controls apoptosis versus apical cell extrusion as alternative tumour-suppressive mechanisms. Cell Death and Disease 15 (10), 746 (2024)

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Basak, A. K.; Piasecka, A.; Hucklenbroich, J.; Tuerksoy, G. M.; Guan, R.; Zhang, P.; Getzke, F.; Garrido-Oter, R.; Hacquard, S.; Strzalka, K. et al.; Bednarek, P.; Yamada, K.; Nakano, R. T.: ER body-resident myrosinases and tryptophan specialized metabolism modulate root microbiota assembly. New Phytologist 241, pp. 329 - 342 (2024)

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Bazakos, C.; Michailidis, M.; Tourvas, N.; Alexiou, K. G.; Mellidou, I.; Polychroniadou, C.; Boutsika, A.; Xanthopoulou, A.; Moysiadis, T.; Skodra, C. et al.; Kollaros, M.-G.; Glavakis, E.; Stournaras, V.; Karagiannis, E.; Aravanopoulos, F.; Molassiotis, A.; Tanou, G.; Ganopoulos, I.: Genetic mosaic of the Mediterranean fig: comprehensive genomic insights from a gene bank collection. Physiologia Plantarum 176 (4), e14482 (2024)

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Boehm, J. W.; Huettel, B.; Schneider, B.; Kube, M.: The complete genome of "Candidatus Phytoplasma fraxini" AshY1 from the ash yellows group. Microbiology Resource Announcements 13 (7) (2024)

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Bohle, F.; Klaus, A.; Ingelfinger, J.; Tegethof, H.; Safari, N.; Schwarzlaender, M.; Hochholdinger, F.; Hahn, M.; Meyer, A. J.; Acosta, I. F. et al.; Mueller-Schuessele, S. J.: Contrasting cytosolic glutathione redox dynamics under abiotic and biotic stress in barley as revealed by the biosensor Grx1-roGFP2. Journal of Experimental Botany 75 (8), pp. 2299 - 2312 (2024)

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Bonthala, V. S.; Stich, B.: StCoExpNet: a global co-expression network analysis facilitates identifying genes underlying agronomic traits in potatoes. Plant Cell Reports 43 (5), 117 (2024)

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Bruenje, A.; Fuessl, M.; Eirich, J.; Boyer, J.-B...; Heinkow, P.; Neumann, U.; Konert, M.; Ivanauskaite, A.; Seidel, J.; Ozawa, S.-I. et al.; Sakamoto, W.; Meinnel, T.; Schwarzer, D.; Mulo, P.; Giglione, C.; Finkemeier, I.: The Plastidial Protein Acetyltransferase GNAT1 Forms a Complex With GNAT2, yet Their Interaction Is Dispensable for State Transitions. Special Issue: Plant Proteomics 23 (11), 100850 (2024)

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Capilla-Perez, L.; Solier, V.; Gilbault, E.; Lian, Q.; Goel, M.; Goel, M.; Huettel, B.; Keurentjes, J. J. B.; Loudet, O.; Mercier, R.: Enhanced recombination empowers the detection and mapping of Quantitative Trait Loci. Communications Biology 7 (1), 829 (2024)

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Carrere, S.; Routaboul, J.-M.; Savourat, P.; Bellenot, C.; Lopéz Marin, H.; Sahoo, A.; Monnens, T. Q.; Ricou, A.; Camilleri, C.; Declerck, N. et al.; Laufs, P.; Mercier, R.; Noel, L. D.: A fully sequenced collection of homozygous EMS mutants for forward and reverse genetic screens in Arabidopsis thaliana. The Plant Journal (2024)

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Castellani, M.; Zhang, M.; Thangavel, G.; Mata Sucre, Y.; Lux, T.; Campoy, J. A.; Marek, M.; Huettel, B.; Sun, H.-Q.; Mayer, K. F. X. et al.; Schneeberger, K.; Marques, A.: Meiotic recombination dynamics in plants with repeat-based holocentromeres shed light on the primary drivers of crossover patterning. Nature Plants (2024)

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Castro, N.; Vilela, B.; Mata-Sucre, Y.; Marques, A.; Gagnon, E.; Lewis, G.; Costa, L.; Souza, G.: Repeatome evolution across space and time: Unravelling repeats dynamics in the plant genus Erythrostemon Klotzsch (Leguminosae Juss). Molecular Ecology, e17510 (2024)

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Cerise, M.: Pathway to Independence - an interview with Martina Cerise. Development 151 (5), dev204228 (2024)

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Cosenza, F.; Shrestha, A.; Van Inghelandt, D.; Casale, F. A.; Wu, P.-Y.; Weisweiler, M.; Li, J. Q.; Wespel, F.; Stich, B.: Genetic mapping reveals new loci and alleles for flowering time and plant height using the double round-robin population of barley. Journal of Experimental Botany 75 (8), pp. 2385 - 2402 (2024)

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Cui, S.; Song, P.; Wang, C.; Chen, S.; Hao, B.; Xu, Z.; Cai, L.; Chen, X.; Zhu, S.; Gan, X. et al.; Dong, H.; Hu, Y.; Zhou, L.; Hou, H.; Tian, Y.; Liu, X.; Chen, L.; Liu, S.; Jiang, L.; Wang, H.; Jia, G.; Zhou, S.; Wan, J.: The RNA binding protein EHD6 recruits the m 6 A reader YTH07 and sequesters OsCOL4 mRNA into phase-separated ribonucleoprotein condensates to promote rice flowering. Molecular Plant 17 (6), pp. 935 - 954 (2024)

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Cullen, E.; Hay, A.: Creating an explosion: Form and function in explosive fruit. Current Opinion in Plant Biology 79, 102543 (2024)

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de los Reyes, P.; Serrano-Bueno, G.; Romero-Campero, F. J.; Gao, H.; Romero, J. M.; Valverde, F.: CONSTANS alters the circadian clock in Arabidopsis thaliana. Molecular Plant 17 (8), pp. 1204 - 1220 (2024)

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de Melo, S. M. F.; Marques, A.; Almeida, C.: The mitochondrial genome sequence of Syagrus coronata (Mart.) Becc. (Arecaceae) is characterized by gene insertion within intergenic spaces. Tree Genetics & Genomes 20 (2), 10 (2024)

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de Ollala, E. B. G.; Cerise, M.; Rodriguez Maroto, G.; Casanova-Ferrer, P.; Vayssières, A.; Severing, E.; Lopez Sampere, Y.; Wang, K.; Schaefer, S.; Formosa-Jordan, P. et al.; Coupland, G.: Coordination of shoot apical meristem shape and identity by APETALA2 during floral transition in Arabidopsis. Nature Communications 15 (1), 6930 (2024)

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de Souza, F. D.; Marques, A.; Almeida, C.: Mitochondrial genome of Hancornia speciosa gomes: intergenic regions containing retrotransposons and predicted genes. Molecular Biology Reports 51 (1), 132 (2024)

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Del Toro-De León, G.; van Boven, J.; Santos-González, J.; Jiao, W.-B.; Peng, H.; Schneeberger, K.; Köhler, C.: Epigenetic and transcriptional consequences in the endosperm of chemically induced transposon mobilization in Arabidopsis. Nucleic Acids Research 53 (15), pp. 8833 - 8848 (2024)

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Dias, Y.; Mata Sucre, Y.; Thangavel, G.; Costa, L.; Báez, M.; Houben, A.; Marques, A.; Pedrosa-Harand, A.: How diverse a monocentric chromosome can be? Repeatome and centromeric organization of Juncus effusus (Juncaceae). The Plant Journal (2024)

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Emmenecker, C.; Pakzad, S.; Ture, F.; Guerin, J.; Hurel, A.; Chambon, A.; Girard, C.; Mercier, R.; Kumar, R.: FIGL1 attenuates meiotic interhomolog repair and is counteracted by the RAD51 paralog XRCC2 and the chromosome axis protein ASY1 during meiosis. New Phytologist 244 (6), pp. 2442 - 2457 (2024)

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Emonet, A.; Hay, A.: Explosive seed dispersal. Current Biology 34, pp. R970 - R972 (2024)

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Emonet, A.; Pérez Antón, M.; Neumann, U.; Dunemann, S.; Huettel, B.; Koller, R.; Hay, A.: Amphicarpic development in the emerging model organism Cardamine chenopodiifolia. New Phytologist 244, pp. 1041 - 1056 (2024)

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Entila, F.; Han, X.; Mine, A.; Schulze-Lefert, P.; Tsuda, K.: Commensal lifestyle regulated by a negative feedback loop between Arabidopsis ROS and the bacterial T2SS. Nature Communications 15 (1), 456 (2024)

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Entila, F.; Tsuda, K.: Taming of the microbial beasts: Plant immunity tethers potentially pathogenic microbiota members. Bioessays, 2400171 (2024)

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Ernst, M.; Mercier, R.; Zwicker, D.: Interference length reveals regularity of crossover placement across species. Nature Communications 15, 8973 (2024)

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Fernandes, J. B.; Naish, M.; Lian, Q.; Burns, R.; Tock, A. J.; Rabanal, F. A.; Wlodzimierz, P.; Habring, A.; Nicholas, R. E.; Weigel, D. et al.; Mercier, R.; Henderson, I. R.: Structural variation and DNA methylation shape the centromere-proximal meiotic crossover landscape in Arabidopsis. Genome Biology 25 (1), 30 (2024)

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Freh, M.; Reinstaedler, A.; Neumann, K. D.; Neumann, U.; Panstruga, R.: The development of pleiotropic phenotypes in powdery mildew-resistant barley and Arabidopsis thaliana mlo mutants is linked to nitrogen availability. Plant, Cell and Environment 47 (7), pp. 2362 - 2376 (2024)

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Fuster-Pons, A.; Murillo-Sanchez, A.; Mendez-Vigo, B.; Marcer, A.; Pieper, B.; Torres-Perez, R.; Oliveros, J. C.; Tsiantis, M.; Pico, F. X.; Alonso-Blanco, C.: The trichome pattern diversity of Cardamine shares genetic mechanisms with Arabidopsis but differs in environmental drivers. Plant Physiology, kiae213 (2024)

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Getzke, F.; Wang, L.; Chesneau, G.; Böhringer, N.; Mesny, F.; Denissen, N.; Wesseler, H.; Adisa, P. T.; Marner, M.; Schulze-Lefert, P. et al.; Schäberle, T. F.; Hacquard, S.: Physiochemical interaction between osmotic stress and a bacterial exometabolite promotes plant disease. Nature Communications 15, 4438 (2024)

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Goel, M.; Campoy, J. A.; Krause, K.; Baus, L. C.; Sahu, A.; Sun, H.-Q.; Walkemeier, B.; Marek, M.; Beaudry, R.; Ruiz, D., D. et al.; Huettel, B.; Schneeberger, K.: The vast majority of somatic mutations in plants are layer-specific. Genome Biology: Biology for the Post-Genomic Era 25 (1), 194 (2024)

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Goto, Y.; Kadota, Y.; Mbengue, M.; Lewis, J.D.; Matsui, H.; Maki, N.; Ngou, B.P.M.; Sklenar, J.; Derbyshire, P.; Shibata, A. et al.; Ichihashi, Y.; Guttman, D.S.; Nakagami, H.; Suzuki, T.; Menke, F.L.H.; Robatzek, S.; Desveaux, D.; Zipfel, C.; Shirasu, K.: The leucine-rich repeat receptor kinase QSK1 regulates PRR–RBOHD complexes targeted by the bacterial effector HopF2Pto. The Plant Cell, koae267 (2024)

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Grones, C.; Eekhout, T.; Shi, D.; Neumann, M.; Berg, L. S.; Ke, Y.; Shahan, R.; Cox, K. L.; Gomez-Cano, F.; Nelissen, H. et al.; Lohmann, J. U.; Giacomello, S.; Martin, O. C.; Cole, B.; Wang, J.-W.; Kaufmann, K.; Raissig, M. T.; Palfalvi, G.; Greb, T.; Libault, M.; De Rybel, B.: Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics. The Plant Cell, koae003, pp. 1 - 17 (2024)

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Hacquard, S.; Martin, F. M.: The chemical language of plant-microbe-microbe associations: an introduction to a Virtual Issue. New Phytologist 244 (3), pp. 739 - 742 (2024)

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Hasegawa, K.; Timmers, T.; Chai, J.; Maekawa, T.: A disease resistance assay in Nicotiana benthamiana reveals the immune function of Response to HopBA1. Plant Physiology, kiae368 (2024)

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Hu, Z.; Wilson Sánchez, D.; Bhatia, N.; Rast, M. I.; Wu, A.; Vlad, D.; McGuire, L.; Nikolov, L. A.; Laufs, P.; Gan, X. et al.; Laurent, S.; Runions, A.; Tsiantis, M.: A CUC1/auxin genetic module links cell polarity to patterned tissue growth and leaf shape diversity in crucifer plants. PNAS 121 (26), e2321877121 (2024)

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Huang, L.; Oekmen, B.; Stolze, S. C.; Kastl, M.; Khan, M.; Hilbig, D.; Nakagami, H.; Djamei, A.; Doehlemann, G.: The fungal pathogen Ustilago maydis targets the maize corepressor RELK2 to modulate host transcription for tumorigenesis. New Phytologist 241 (4), pp. 1747 - 1762 (2024)

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MPIPZ Scientific Publications since 2002

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