Journal Article (2291)

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Song, B.; Sang, Q.; Wang, H.; Pei, H.; Gan, X.; Wang, F.: Complement Genome Annotation Lift Over Using a Weighted Sequence Alignment Strategy. Frontiers in Genetics 10, 1046 (2019)
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Stephan, L.; Tilmes, V.; Huelskamp, M.: Selection and validation of reference genes for quantitative Real-Time PCR in Arabis alpina. PLOS ONE 14 (3), e0211172 (2019)
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Sun, H.-Q.; Rowan, B. A.; Flood, P. J.; Brandt, R.; Fuss, J.; Hancock, A. M.; Michelmore, R. W.; Huettel, B.; Schneeberger, K.: Linked-read sequencing of gametes allows efficient genome-wide analysis of meiotic recombination. Nature Communications 10, 4310 (2019)
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Takou, M.; Wieters, B.; Kopriva, S.; Coupland, G.; Linstädter, A.; De Meaux, J.: Linking genes with ecological strategies in Arabidopsis thaliana. Journal of Experimental Botany 70, pp. 1141 - 1151 (2019)
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Thiergart, T.; Zgadzaj, R.; Bozsóki, Z.; Garrido-Oter, R.; Radutoiu, S.; Schulze-Lefert, P.: Lotus japonicus symbiosis genes impact microbial interactions between symbionts and multikingdom commensal communities. mBio 10, e01833-19 (2019)
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Tilmes, V.; Mateos, J. L.; Madrid-Herrero, E.; Vincent, C.; Severing, E.; Carrera, E.; Lopez-Diaz, I.; Coupland, G.: Gibberellins Act Downstream of Arabis PERPETUAL FLOWERING1 to Accelerate Floral Induction during Vernalization. Plant Physiology 180 (3), pp. 1549 - 1563 (2019)
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Uemura, T.; Nakano, R. T.; Takagi, J.; Wang, Y.; Kramer, K.; Finkemeier, I.; Nakagami, H.; Tsuda, K.; Ueda, T.; Schulze-Lefert, P. et al.; Nakano, A.: A Golgi-Released Subpopulation of the Trans-Golgi Network Mediates Protein Secretion in Arabidopsis. Plant Physiology 179 (2), pp. 519 - 532 (2019)
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Vannier, N.; Agler, M.; Hacquard, S.: Microbiota-mediated disease resistance in plants. PLoS Pathogens 15 (6), e1007740 (2019)
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Vayssières, A.; Mishra, P.; Roggen, A.; Ponraj, U.; Neumann, U.; Theres, K.; Liung, K.; Albani, M.: Flowering behaviour in Arabis alpina ensures the maintenance of a perennating dormant bud bank. bioRxiv, 562868 (2019)
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Vinegra de la Torre, N.; Kaschani, F.; Kaiser, M.; van der Hoorn, R. A. L.; Soppe, W.; Misas-Villamil, J.: Dynamic hydrolase labelling as a marker for seed quality in Arabidopsis seeds. Biochemical Journal 476, pp. 843 - 857 (2019)
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Voges, M. J. E. E. E.; Bai, Y.; Schulze-Lefert, P.; Sattely, E. S.: Plant-derived coumarins shape the composition of an Arabidopsis synthetic root microbiome. Proceedings of the National Academy of Sciences of the United States of America 116 (25), pp. 12558 - 12565 (2019)
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Voss, M.; Toelzer, C.; Bhandari, D. D.; Parker, J. E.; Niefind, K.: Arabidopsis immunity regulator EDS1 in a PAD4/SAG101-unbound form is a monomer with an inherently inactive conformation. Journal of Structural Biology 208, 107390 (2019)
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Wang, Y.; Garrido-Oter, R.; Wu, J.; Winkelmueller, T. M.; Agler, M.T.; Colby, T.; Nobori, T.; Kemen, E.; Tsuda, K.: Site-specific cleavage of bacterial MucD by secreted proteases mediates antibacterial resistance in Arabidopsis. Nature Communications 10, 2853 (2019)
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Wawra, S.; Fesel, P.; Widmer, H.; Neumann, U.; Lahrmann, U.; Becker, S.; Hehemann, J.-H.; Langen, G.; Zuccaro, A.: FGB1 and WSC3 are in planta-induced beta-glucan-binding fungal lectins with different functions. New Phytologist 222 (3), pp. 1493 - 1506 (2019)
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Wippel, K.; Schulze-Lefert, P.; Garrido Oter, R.: Rhizobien in der Pflanzenmikrobiota: Evolution der Wurzelknöllchensymbiose und Funktionen der Mikrobiota für den Pflanzenwirt. Biologie in unserer Zeit 49 (6), pp. 426 - 434 (2019)
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Wolinska, K. W.; Berens, M. L.: Optimal Defense Theory 2.0: tissue-specific stress defense prioritization as an extra layer of complexity. Communicative & Integrative Biology 12 (1), pp. 91 - 95 (2019)
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Xiao, Y.; Stegmann, M.; Han, Z.; DeFalco, T. A.; Parys, K.; Xu, L.; Belkhadir, Y.; Zipfel, C.; Chai, J.: Mechanisms of RALF peptide perception by a heterotypic receptor complex. Nature 572 (7768), pp. 270 - + (2019)
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Yang, C.; Hamamura, Y.; Sofroni, K.; Böwer, F.; Stolze, S. C.; Nakagami, H.; Nakagami, H.; Schnittger, A.: SWITCH 1/DYAD is a WINGS APART-LIKE antagonist that maintains sister chromatid cohesion in meiosis. Nature Communications 10, 1755 (2019)
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Yasui, Y.; Tsukamoto, S.; Sugaya, T.; Nishihama, R.; Wang, Q.; Kato, H.; Yamato, K.; Fukaki, H.; Mimura, T.; Kubo, H. et al.; Theres, K.; Theres, K.; Kohchi, T.; Ishizaki, K.: GEMMA CUP-ASSOCIATED MYB1, an Ortholog of Axillary Meristem Regulators, Is Essential in Vegetative Reproduction in Marchantia polymorpha. Current Biology 29 (23), pp. 3987 - 3995.e5 (2019)
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Yoshida, S.; Van der Schuren, A.; van Dop, M.; van Galen, L.; Saiga, S.; Adibi, M.; Moller, B.; ten Hove, C. A.; Marhavy, P.; Smith, R. S. et al.; Friml, J.; Weijers, D.: A SOSEKI-based coordinate system interprets global polarity cues in Arabidopsis. Nature Plants 5 (2), pp. 160 - 166 (2019)
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Zhang, J.; Liu, Y.-X.; Zhang, N.; Hu, B.; Jin, T.; Xu, H.; Qin, Y.; Yan, P.; Zhang, X.; Guo, X. et al.; Hui, J.; Cao, S.; Wang, X.; Wang, C.; Wang, H.; Qu, B.; Fan, G.; Yuan, L.; Garrido-Oter, R.; Chu, C.; Bai, Y.: NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice. Nature Biotechnology 37 (6), pp. 676 - 684 (2019)
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Zicola, J.; Liu, L.; Tänzler, P.; Turck, F.: Targeted DNA methylation represses two enhancers of FLOWERING LOCUS T in Arabidopsis thaliana. Nature Plants (2019)
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Amorim, M. d. F.; Willing, E.-M.; Szabo, E. X.; Francisco-Mangilet, A. G.; Droste-Borel, I.; Macek, B.; Schneeberger, K.; Laubinger, S.: The U1 snRNP Subunit LUC7 Modulates Plant Development and Stress Responses via Regulation of Alternative Splicing. The Plant Cell 30 (11), pp. 2838 - 2854 (2018)
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Ashoub, A.; Mueller, N.A.; Jimenez-Gomez, J. M.; Brueggemann, W.: Prominent alterations of wild barley leaf transcriptome in response to individual and combined drought acclimation and heat shock conditions. Physiologia Plantarum 163 (1), pp. 18 - 29 (2018)
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Atanasov, K. E.; Liu, C.; Erban, A.; Kopka, J.; Parker, J. E.; Alcázar, R.: NLR mutations suppressing immune hybrid incompatibility and their effects on disease resistance. Plant Physiology 177, pp. 1152 - 1169 (2018)
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Bezrutczyk, M.; Hartwig, T.; Horschman, M.; Char, S. N.; Yang, J.; Yang, B.; Frommer, W. B.; Sosso, D.: Impaired phloem loading in zmsweet13a,b,c sucrose transporter triple knock-out mutants in Zea mays. New Phytologist 218 (2), pp. 594 - 603 (2018)
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Bezrutczyk, M.; Yang, J.; Eom, J.-S.; Prior, M.; Sosso, D.; Hartwig, T.; Szurek, B.; Oliva, R.; Vera-Cruz, C.; White, F. F. et al.; Yang, B.; Frommer, W. B.: Sugar flux and signaling in plant-microbe interactions. The Plant Journal 93 (4), pp. 675 - 685 (2018)
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Bhosale, R.; Boudolf, V.; Cuevas, F.; Lu, R.; Eekhout, T.; Hu, Z.; Van Isterdael, G.; Lambert, G. M.; Xu, F.; Nowack, M.K. et al.; Smith, R. S.; Vercauteren, I.; De Rycke, R.; Storme, V.; Beeckman, T.; Larkin, J. C.; Kremer, A.; Hofte, H.; Galbraith, D.W.; Kumpf, R. P.; Maere, S.; De Veylder, L.: A Spatiotemporal DNA Endoploidy Map of the Arabidopsis Root Reveals Roles for the Endocycle in Root Development and Stress Adaptation. The Plant Cell 30 (10), pp. 2330 - 2351 (2018)
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Birkenbihl, R.; Kracher, B.; Ross, A.; Kramer, K.; Finkemeier, I.; Somssich, I. E.: Principles and characteristics of the Arabidopsis WRKY regulatory network during early MAMP-triggered immunity. The Plant Journal 96 (3), pp. 487 - 502 (2018)
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Blum, C. F.; Heramvand, N.; Khonsari, A. S.; Kollmann, M.: Experimental noise cutoff boosts inferability of transcriptional networks in large-scale gene-deletion studies. Nature Communications 9, 133 (2018)
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Castro, P. H.; Bachmair, A.; Bejarano, E. R.; Coupland, G.; Maria Lois, L.; Sadanandom, A.; van den Burg, H. A.; Vierstra, R. D.; Azevedo, H.: Revised nomenclature and functional overview of the ULP gene family of plant deSUMOylating proteases. Special Issue 69 (19), pp. 4505 - 4509 (2018)
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Cui, H.; Qiu, J.; Zhou, Y.; Bhandari, D. D.; Zhao, C.; Bautor, J.; Parker, J. E.: Antagonism of Transcription Factor MYC2 by EDS1/PAD4 Complexes Bolsters Salicylic Acid Defense in Arabidopsis Effector-Triggered Immunity. Molecular Plant 11 (8), pp. 1053 - 1066 (2018)
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Das Gupta, M.; Tsiantis, M.: Gene networks and the evolution of plant morphology. Current Opinion in Plant Biology 45, pp. 82 - 87 (2018)
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Davis, A. M.; Ronald, J.; Ma, Z.; Wilkinson, A. J.; Philippou, K.; Shindo, T.; Queitsch, C.; Davis, S. J.: HSP90 Contributes to Entrainment of the Arabidopsis Circadian Clock via the Morning Loop. Genetics 210 (4), pp. 1383 - 1390 (2018)
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Deveau, A.; Bonito, G.; Uehling, J.; Paoletti, M.; Becker, M.; Bindschedler, S.; Hacquard, S.; Herve, V.; Labbe, J.; Lastovetsky, O. A. et al.; Mieszkin, S.; Millet, L. J.; Vajna, B.; Junier, P.; Bonfante, P.; Krom, B. P.; Olsson, S.; van Elsas, J. D.; Wick, L. Y.: Bacterial-fungal interactions: ecology, mechanisms and challenges. FEMS Microbiology Reviews 42 (3), fuy008, pp. 335 - 352 (2018)
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Di Ruocco, G.; Bertolotti, G.; Pacifici, E.; Polverari, L.; Tsiantis, M.; Sabatini, S.; Costantino, P.; Dello Ioio, R.: Differential spatial distribution of miR165/6 determines variability in plant root anatomy. Development 145 (1), UNSP dev153858 (2018)
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Diaz, M.; Pecinka, A.: Scaffolding for Repair: Understanding Molecular Functions of the SMC5/6 Complex. GENES 9 (1), 36 (2018)
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Dijkhuizen, L. W.; Brouwer, P.; Bolhuis, H.; Reichart, G.-J.; Koppers, N.; Huettel, B.; Bolger, A.M.; Li, F.-W.; Cheng, S.; Liu, X. et al.; Wong, G. K.-S.; Pryer, K.; Weber, A.; Braeutigam, A.; Schluepmann, H.: Is there foul play in the leaf pocket? The metagenome of floating fern Azolla reveals endophytes that do not fix N-2 but may denitrify. NEW PHYTOLOGIST 217 (1), pp. 453 - 466 (2018)
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Dittberner, H.; Korte, A.; Mettler-Altmann, T.; Weber, A. P. M.; Monroe, G.; de Meaux, J.: Natural variation in stomata size contributes to the local adaptation of water-use efficiency in Arabidopsis thaliana. Molecular Ecology 27 (20), pp. 4052 - 4065 (2018)
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Durán, P.; Thiergart, T.; Garrido-Oter, R.; Agler, M.T.; Kemen, E.; Schulze-Lefert, P.; Hacquard, S.: Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival. Cell 175 (4), pp. 973 - + (2018)
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Failmezger, H.; Lempe, J.; Khadem, N.; Cartolano, M.; Tsiantis, M.; Tresch, A.: MowJoe: a method for automated-high throughput dissected leaf phenotyping. Plant Methods 14, 27 (2018)
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Fichman, Y.; Koncz, Z.; Reznik, N.; Miller, G.; Szabados, L.; Kramer, K.; Nakagami, H.; Fromm, H.; Koncz, C.; Zilberstein, A.: SELENOPROTEIN O is a chloroplast protein involved in ROS scavenging and its absence increases dehydration tolerance in Arabidopsis thaliana. Plant Science 270, pp. 278 - 291 (2018)
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Flood, P. J.; Theeuwen, T. P. J. M.; Schneeberger, K.; Keizer, P.; Kruijer, W.; Severing, E.; Kouklas, E.; Hageman, J. A.; Becker, F. F. M.; Schnabel, S. K. et al.; Willems, L.; Ligterink, W.; van Arkel, J.; Mumm, R.; Gualberto, J. M.; Savage, L.; Kramer, D. M.; Kreurentjes, J. J. B.; van Eeuwijk, F.; Koornneef, M.; Harbinson, J.; Aarts, M. G. M.; Wijnker, E.: Reciprocal cybrids reveal how organellar genomes affect plant phenotypes. bioRxiv, 477687 (2018)
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Frantzeskakis, L.; Kracher, B.; Kusch, S.; Maekawa-Yoshikawa, M.; Bauer, S.; Pedersen, C.; Spanu, P.; Maekawa, T.; Schulze-Lefert, P.; Panstruga, R.: Signatures of host specialization and a recent transposable element burst in the dynamic one-speed genome of the fungal barley powdery mildew pathogen. BMC Genomics 19, 381 (2018)
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Fulgione, A.; Hancock, A. M.: Archaic lineages broaden our view on the history of Arabidopsis thaliana. New Phytologist 219 (4), pp. 1194 - 1198 (2018)
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Fulgione, A.; Koornneef, M.; Roux, F.; Hermisson, J.; Hancock, A. M.: Madeiran Arabidopsis thaliana Reveals Ancient Long-Range Colonization and Clarifies Demography in Eurasia. Molecular Biology and Evolution 35 (3), pp. 564 - 574 (2018)
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Galstyan, A.; Hay, A.: Snap, crack and pop of explosive fruit. Current Opinion in Genetics & Development 51, pp. 31 - 36 (2018)
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Garrido Oter, R.; Nakano, R. T.; Dombrowski, N.; Ma, K.-W.; AgBiome Team, T.; McHardy, A.; Schulze-Lefert, P.: Modular traits of the Rhizobiales root microbiota and their evolutionary relationship with symbiotic rhizobia. Cell Host & Microbe 24, pp. 155 - 167 (2018)
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Gupta, R.; Min, C. W.; Kramer, K.; Agrawal, G. K.; Rakwal, R.; Park, K.-H.; Wang, Y.; Finkemeier, I.; Kim, S. T.: A Multi-Omics Analysis of Glycine max Leaves Reveals Alteration in Flavonoid and Isoflavonoid Metabolism Upon Ethylene and Abscisic Acid Treatment. PROTEOMICS 18 (7), 1700366 (2018)
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Hagemann, M.; Gaertner, K.; Scharnagl, M.; Bolay, P.; Lott, S. C.; Fuß, J.; Huettel, B.; Reinhardt, R.; Klaehn, S.; Hess, W. R.: Identification of the DNA methyltransferases establishing the methylome of the cyanobacterium Synechocystis sp PCC 6803. DNA RESEARCH 25 (4), pp. 343 - 352 (2018)
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