Scientific Publications since 2002 | Max Planck Institute for Plant Breeding Research

Max Planck Institute for Plant Breeding Research

Journal Article (2291)

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Wang, Y.; Underwood, C. J.: The Apomixis. Current Biology 33 (8) (2023)

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Wanke, A.; van Boerdonk, S.; Mahdi, L. K.; Wawra, S.; Neidert, M.; Chandrasekar, B.; Saake, P.; Saur, I. M. L.; Derbyshire, P.; Holton, N. et al.; Menke, F. L. H.; Brands, M.; Pauly, M.; Acosta, I.; Zipfel, C.; Zuccaro, A.: A GH81-type β-glucan-binding protein enhances colonization by mutualistic fungi in barley. Current Biology 33 (23), pp. 5071 - 5084.e7 (2023)

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Weisweiler, M.; Stich, B.: Benchmarking of structural variant detection in the tetraploid potato genome using linked-read sequencing. Genomics 115 (2), 110568 (2023)

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Wu, P.Y.; Stich, B.; Renner, J.; Muders, K.; Prigge, V.; van Inghelandt, D.: Optimal implementation of genomic selection in clone breeding programs-Exemplified in potato: I. Effect of selection strategy, implementation stage, and selection intensity on short-term genetic gain. The Plant Genome 16 (2), e20327 (2023)

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Wu, Y.; Sun, Y.; Richet, E.; Han, Z.; Chai, J.: Structural basis for negative regulation of the Escherichia coli maltose system. Nature Communications 14 (1), 4925 (2023)

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Wunder, J.; Fulgione, A.; Toraeng, P.; Woetzel, S.; Herzog, M.; Obeso, J. R.; Kourmpetis, Y.; van Ham, R.; Odong, T.; Bink, M. et al.; Kemi, U.; Agren, J.; Coupland, G.: Adaptation of perennial flowering phenology across the European range of Arabis alpina. Proceedings of the Royal Society of London Series B 290 (2011), 20231401 (2023)

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Xu, M.-R.-X.; Liao, Z.-Y.; Brock, J. R.; Du, K.; Li, G.-Y.; Chen, Z.-Q.; Wang, Y.-H.; Gao, Z.-N.; Agarwal, G.; Wei, K. H.-C. et al.; Shao, F.; Pang, S.; Platts, A. E.; Van de Velde, J. D.; Lin, H.-M.; Teresi, S. J.; Bird, K.; Niederhuth, C. E.; Xu, J.-G.; Yu, G.-H.; Yang, J.-Y.; Dai, S.-F.; Nelson, A.; Braasch, I.; Zhang, X.-G.; Schartl, M.; Edger, P. P.; Han, M.-J.; Zhang, H.-H.: Maternal dominance contributes to subgenome differentiation in allopolyploid fishes. Nature Communications 14 (1), 8357 (2023)

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Yotsui, I.; Matsui, H.; Miyauchi, S.; Iwakawa, H.; Melkonian, K.; Schlueter, T.; Michavila, S.; Kanazawa, T.; Nomura, Y.; Stolze, S. C. et al.; Jeon, H.-W.; Yan, Y.; Harzen, A.; Sugano, S. S.; Shirakawa, M.; Nishihama, R.; Ichihashi, Y.; Gimenez Ibanez, S.; Shirasu, K.; Ueda, T.; Kohchi, T.; Nakagami, H.: LysM-mediated signaling in Marchantia polymorpha highlights the conservation of pattern-triggered immunity in land plants. Current Biology (2023)

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Zeng, Y.; Zheng, Z.; Hessler, G.; Zou, K.; Bautor, J.; Stuttmann, J.; Xue, L.; Parker, J. E.; Cui, H.: Arabidopsis PAD4 promotes the maturation and nuclear accumulation of immune-related cysteine protease RD19. Journal of Experimental Botany, erad454 (2023)

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Zuo, W.; Depotter, J. R. L.; Stolze, S. C.; Nakagami, H.; Doehlemann, G.: A transcriptional activator effector of Ustilago maydis regulates hyperplasia in maize during pathogen-induced tumor formation. Nature Communications 14 (1), 6722 (2023)

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Acevedo Garcia, J.; Walden, K.; Leissing, F.; Baumgarten, K.; Drwiega, K.; Kwaaitaal, M.; Reinstadler, A.; Freh, M.; Dong, X.; James, G. V. et al.; Baus, L. C.; Mascher, M.; Stein, N.; Schneeberger, K.; Brocke-Ahmadinejad, N.; Kollmar, M.; Schulze-Lefert, P.; Panstruga, R.: Barley Ror1 encodes a class XI myosin required for mlo-based broad-spectrum resistance to the fungal powdery mildew pathogen. The Plant Journal (2022)

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Almario, J.; Mahmoudi, M.; Kroll, S.; Agler, M.T.; Placzek, A.; Mari, A.; Kemen, E.: The Leaf Microbiome of Arabidopsis Displays Reproducible Dynamics and Patterns throughout the Growing Season. mBio 13 (3) (2022)

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Amanda, D.; Frey, F. P.; Neumann, U.; Przybyl, M.; Šimura, J.; Zhang, Y.; Chen, Z.; Gallavotti, A.; Fernie, A. R.; Ljung, K. et al.; Acosta, I. F.: Auxin boosts energy generation pathways to fuel pollen maturation in barley. Current Biology (2022)

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Bonthala, V. S.; Stich, B.: Genetic Divergence of Lineage-Specific Tandemly Duplicated Gene Clusters in Four Diploid Potato Genotypes. Frontiers in Plant Science 13, 875202 (2022)

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Bourceret, A.; Guan, R.; Dorau, K.; Mansfeldt, T.; Omidbakhshfard, A.; Medeiros, D. B.; Fernie, A. R.; Hofmann, J.; Sonnewald, U.; Mayer, J. et al.; Gerlach, N.; The RECONSTRUCT consortium; Bucher, M.; Garrido Oter, R.; Spaepen, S.; Schulze-Lefert, P.: Maize Field Study Reveals Covaried Microbiota and Metabolic Changes in Roots over Plant Growth. mBio, e02584-21 (2022)

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Bowman, J. L.; Arteaga-Vazquez, M.; Berger, F.; Briginshaw, L. N.; Carella, P.; Aguilar-Cruz, A.; Davies, K. M.; Dierschke, T.; Dolan, L.; Dorantes-Acosta, A. E. et al.; Fisher, T. J.; Flores-Sandoval, E.; Futagami, K.; Ishizaki, K.; Jibran, R.; Kanazawa, T.; Kato, H.; Kohchi, T.; Levins, J.; Lin, S.-S.; Nakagami, H.; Nishihama, R.; Romani, F.; Schornack, S.; Tanizawa, Y.; Tsuzuki, M.; Ueda, T.; Watanabe, Y.; Yamato, K. T.; Zachgo, S.: The renaissance and enlightenment of Marchantia as a model system. Plant Cell 27, pp. 3512 - 3542 (2022)

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Casale, F.; Van Inghelandt, D.; Weisweiler, M.; Li, J. Q.; Stich, B.: Genomic prediction of the recombination rate variation in barley - A route to highly recombinogenic genotypes. Plant Biotechnology Journal 20, pp. 676 - 690 (2022)

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Chandrasekar, B.; Wanke, A.; Wawra, S.; Saake, P.; Mahdi, L.; Charura, N.; Neidert, M.; Poschmann, G.; Malisic, M.; Thiele, M. et al.; Stuehler, K.; Dama, M.; Pauly, M.; Zuccaro, A.: Fungi hijack a ubiquitous plant apoplastic endoglucanase to release a ROS scavenging beta-glucan decasaccharide to subvert immune responses. Plant Cell 34 (7), pp. 2765 - 2784 (2022)

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Copeland, C.: The feeling is mutual: Increased host putrescine biosynthesis promotes both plant and endophyte growth. Plant Physiology 188 (4), pp. 1939 - 1941 (2022)

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Dongus, J. A.; Bhandari, D. D.; Penner, E.; Lapin, D.; Stolze, S. C.; Harzen, A.; Patel, M.; Archer, L.; Dijkgraaf, L.; Shah, J. et al.; Nakagami, H.; Parker, J. E.: Cavity surface residues of PAD4 and SAG101 contribute to EDS1 dimer signaling specificity in plant immunity. The Plant Journal 110 (5), pp. 1415 - 1432 (2022)

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Durán, P.; Ellis, T. J.; Thiergart, T.; Agren, J.; Hacquard, S.: Climate drives rhizosphere microbiome variation and divergent selection between geographically distant Arabidopsis populations. New Phytologist 236, pp. 608 - 621 (2022)

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Durán, P.; Flores-Uribe, J.; Wippel, K.; Zhang, P.; Guan, R.; Melkonian, B.; Melkonian, M.; Garrido Oter, R.; Zhang, P.: Shared features and reciprocal complementation of the Chlamydomonas and Arabidopsis microbiota. Nature Communications 13 (406) (2022)

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Durand, S.; Lian, Q.; Jing. J., J.; Ernst, M.; Grelon, M.; Zwicker, D.; Mercier, R.: Joint control of meiotic crossover patterning by the synaptonemal complex and HEI10 dosage. Nature Communications 13, 5999 (2022)

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Emonet, A.; Hay, A.: Development and diversity of lignin patterns. Plant Physiology 190 (1), pp. 31 - 43 (2022)

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Flood, P. J.; Nowrousian, M.; Huettel, B.; Woehle, C.; Becker, K.; Wollenweber, T. E.; Begerow, D.; Grefen, C.: Draft genome of the aardaker (Lathyrus tuberosus L.), a tuberous legume. BMC genomic data 23 (1), 70 (2022)

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Foerderer, A.; Li, E.; Lawson, A. W.; Deng, Y.-N.; Sun, Y.; Logemann, E.; Zhang, X.; Wen, J.; Han, Z.; Chang, J. et al.; Chen, Y.; Schulze-Lefert, P.; Chai, J.: A wheat resistosome defines common principles of immune receptor channels. Nature 610, pp. 532 - 539 (2022)

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Foerderer, A.; Yu, D.; Li, E.; Chai, J.: Resistosomes at the interface of pathogens and plants. Current Opinion in Plant Biology 67, 102212 (2022)

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Fuessl, M.; König, A.-C.; Eirich, J.; Hartl, M.; Kleinknecht, L.; Bohne, A.-V.; Harzen, A.; Kramer, K.; Leister, D.; Nickelsen, J. et al.; Finkemeier, I.: Dynamic light- and acetate-dependent regulation of the proteome and lysine acetylome of Chlamydomonas. The Plant Journal 109 (1), pp. 261 - 277 (2022)

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Fulgione, A.; Neto, C.; Elfarargi, A. F.; Tergemina, E.; Ansari, S.; Göktay, M.; Dinis, H.; Döring, N.; Flood, P. J.; Rodriguez-Pacheco, S. et al.; Walden, N.; Koch, M.A.; Roux, F.; Hermisson, J.; Hancock, A. M.: Parallel reduction in flowering time from de novo mutations enable evolutionary rescue in colonizing lineages. Nature Communications 13 (1), 1461 (2022)

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Gao, H.; Coupland, C.: PIF4 and CDF2 co-operate to regulate cell elongation in Arabidopsis thaliana. Nature Plants (2022)

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Gao, H.; Song, W.; Severing, E.; Vayssières, A.; Huettel, B.; Franzen, R.; Richter, R.; Chai, J.; Coupland, G.: PIF4 enhances DNA binding by CDF2 to co-regulate target gene expression and promote Arabidopsis hypocotyl cell elongation. Nature Plants 8, pp. 1082 - 1093 (2022)

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Goel, M.; Schneeberger, K.: plotsr: visualizing structural similarities and rearrangements between multiple genomes. Bioinformatics 38 (10), pp. 2922 - 2926 (2022)

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Hacquard, S.; Wang, E.; Slater, H.; Martin, F.: Impact of global change on the plant microbiome. Special Issue 234 (6), pp. 1907 - 1909 (2022)

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Hajheidari, M.; Gerlach, N.; Dorau, K.; Omidbakhshfard, M. A.; Pesch, L.; Hofmann, J.; Hallab, A.; Ponce-Soto, G. Y.; Kuhalskaya, A.; Medeiros, D. B. et al.; Bourceret, A.; the RECONSTRUCT Consortium; Usadel, B.; Mayer, J.; Fernie, A.; Mansfeldt, T.; Sonnewald, U.; Bucher, M.: Crop genetic diversity uncovers metabolites, elements, and gene networks predicted to be associated with high plant biomass yields in maize. PNAS Nexus 4 (1), pgac068 (2022)

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Hofstatter, P. G.; Thangavel, G.; Lux, T.; Neumann, P.; Vondrak, T.; Novak, P.; Zhang, M.; Costa, L.; Castellani, M.; Scott, A. et al.; Toegelová, H.; Fuchs, J.; Mata-Sucre, Y.; Dias, Y.; Vanzela, A. L. L.; Huettel, B.; Almeida, C. C. S.; Šimková, H.; Souza, G.; Pedrosa-Harand, A.; Macas, J.; Mayer, K. F. X.; Houben, A.; Marques, A.: Repeat-based holocentromeres influence genome architecture and karyotype evolution. Cell (2022)

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Huang, S.; Jia, A.; Song, W.; Hessler, G.; Meng, Y.; Sun, Y.; Xu, L.; Laessle, H.; Jirschitzka, J.; Ma, S. et al.; Xiao, Y.; Yu, D.; Hou, J.; Liu, R.; Sun, H.; Liu, X.; Han, Z.; Chang, J.; Parker, J. E.; Chai, J.: Identification and receptor mechanism of TIR-catalyzed small molecules in plant immunity. Science (2022)

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Jia, A.; Huang, S.; Song, W.; Wang, J.; Meng, Y.; Sun, Y.; Xu, L.; Laessle, H.; Jirschitzka, J.; Hou, J. et al.; Zhang, T.; Yu, W.; Hessler, G.; Li, E.; Ma, S.; Yu, D.; Gebauer, J.; Baumann, U.; Liu, X.; Han, Z.; Chang, J.; Parker, J. E.; Chai, J.: TIR-catalyzed ADP-ribosylation reactions produce signaling molecules for plant immunity. Science (2022)

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Lapin, D.; Johanndrees, O.; Wu, Z.; Li, X.; Parker, J. E.: Molecular innovations in plant TIR-based immunity signaling. Plant Cell 34, pp. 1479 - 1496 (2022)

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Lebreton, A.; Tang, N.; Kuo, A.; LaButti, K.; Andreopoulos, W.; Drula, E.; Miyauchi, S.; Barry, K.; Clum, A.; Lipzen, A. et al.; Mousain, D.; Ng, V.; Wang, R.; Dai, Y.; Henrissat, B.; Grigoriev, I. V.; Guerin-Laguette, A.; Yu, F.; Martin, F. M.: Comparative genomics reveals a dynamic genome evolution in the ectomycorrhizal milk-cap (Lactarius) mushrooms. New Phytologist 235 (1), pp. 306 - 319 (2022)

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Lian, Q.; Solier, V.; Walkemeier, B.; Durand, S.; Huettel, B.; Schneeberger, K.; Mercier, R.: The megabase-scale crossover landscape is largely independent of sequence divergence. Nature Communications 13 (1), 3828 (2022)

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Liang, Z.; Myers, Z. A.; Petrella, D.; Engelhorn, J.; Hartwig, T.; Springer, N. M.: Mapping responsive genomic elements to heat stress in a maize diversity panel. Genome Biology 23 (1), 234 (2022)

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Liu, L.; Song, W.; Huang, S.; Jiang, K.; Moriwaki, Y.; Wang, Y.; Men, Y.; Zhang, D.; Wen, X.; Han, Z. et al.; Chai, J.; Guo, H.: Extracellular pH sensing by plant cell-surface peptide-receptor complexes. Cell 185 (18), pp. 3341 - 3355.e13 (2022)

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Liu, S.; Strauss, S.; Adibi, M.; Mosca, G.; Yoshida, S.; Dello Ioio, R.; Runions, A.; Andersen, T. G.; Grossmann, G.; Huijser, P. et al.; Smith, R. S.; Tsiantis, M.: Cytokinin promotes growth cessation in the Arabidopsis root. Current Biology 32 (9), pp. 1974 - 1985 (2022)

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Llamas, E.; Koyuncu, S.; Lee, H. J.; Gutierrez-Garcia, R.; Dunken, N.; Charura, N.; Torres-Montilla, S.; Schlimgen, E.; Pulido, P.; Rodriguez-Concepcion, M. et al.; Zuccaro, A.; Vilchez, D.: Chloroplast protein import determines plant proteostasis and retrograde signaling. bioRxiv: the preprint server for biology, 2022.03.19.484971; (2022)

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Loo, E. P. -.; Tajima, Y.; Yamada, K.; Kido, S.; Hirase, T.; Ariga, H.; Fujiwara, T.; Tanaka, K.; Taji, T.; Somssich, I. E. et al.; Parker, J. E.; Saijo, Y.: Recognition of Microbe- and Damage-Associated Molecular Patterns by Leucine-Rich Repeat Pattern Recognition Receptor Kinases Confers Salt Tolerance in Plants. Molecular Plant-Microbe Interactions 35 (7), pp. 554 - 566 (2022)

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Ma, K.-W.; Ordon, J.; Schulze-Lefert, P.: Gnotobiotic Plant Systems for Reconstitution and Functional Studies of the Root Microbiota. Current Protocols 2, e362 (2022)

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Majda, M.; Trozzi, N.; Mosca, G.; Smith, R. S.: How Cell Geometry and Cellular Patterning Influence Tissue Stiffness. International Journal of Molecular Sciences 23 (10), 5651 (2022)

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Mataigne, V.; Vannier, N.; Vandenkoornhuyse, P.; Hacquard, S.: Multi-genome metabolic modeling predicts functional inter-dependencies in the Arabidopsis root microbiome. Microbiome 10, 217 (2022)

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Matsumoto, A.; Schlueter, T.; Melkonian, K.; Takeda, A.; Nakagami, H.; Mine, A.: p A versatile Tn7 transposon-based bioluminescence tagging tool for quantitative and spatial detection of bacteria in plants. Plant Communications 3 (1), 100227 (2022)

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Melkonian, K.; Stolze, S. C.; Harzen, A.; Nakagami, H.: miniTurbo-based interactomics of two plasma membrane-localized SNARE proteins in Marchantia polymorpha. New Phytologist 235 (2), pp. 786 - 800 (2022)

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