Journal Article (2416)

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Schneeberger, K.: Using next-generation sequencing to isolate mutant genes from forward genetic screens. Nature Reviews Genetics 15 (10), pp. 662 - 676 (2014)
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Schreiber, L. K.; Nader Nieto, A. C.; Schoenhals, E. M.; Walkemeier, B.; Gebhardt, C.: SNPs in Genes Functional in Starch-Sugar Interconversion Associate with Natural Variation of Tuber Starch and Sugar Content of Potato (Solanum tuberosum L.). G3-GENES GENOMES GENETICS 4 (10), pp. 1797 - 1811 (2014)
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Seyfferth, C.; Tsuda, K.: Salicylic acid signal transduction: the initiation of biosynthesis, perception and transcriptional reprogramming. Frontiers in Plant Science 9, 00697, p. 697 (2014)
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Shanmugam, R.; Aklujkar, M.; Schaefer, M.; Reinhardt, R.; Nickel, O.; Reuter, G.; Lovley, D. R.; Ehrenhofer-Murray, A.; Nelle, W.; Ankri, S. et al.; Helm, M.; Jurkowski, T. P.; Jeltsch, A.: The Dnmt2 RNA methyltransferase homolog of Geobacter sulfurreducens specifically methylates tRNA-Glu. Nucleic Acids Research (London) 42 (10), pp. 6487 - 6496 (2014)
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Sharma, R.; Bhardwaj, V.; Dalamu, D.; Kaushik, S. K.; Singh, B. P.; Sharma, S.; Umamaheshwari, R.; Baswaraj, R.; Kumar, V.; Gebhardt, C.: Identification of elite potato genotypes possessing multiple disease resistance genes through molecular approaches. SCIENTIA HORTICULTURAE 179, pp. 204 - 211 (2014)
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Sharma, R.; Rawat, V.; Suresh, C. G.: Genome-Wide Identification and Tissue-Specific Expression Analysis of UDP-Glycosyltransferases Genes Confirm Their Abundance in Cicer arietinum (Chickpea) Genome. PLOS ONE 9 (10), e109715 (2014)
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Siewert, C.; Hess, W. R.; Duduk, B.; Huettel, B.; Reinhardt, R.; Buettner, C.; Kube, M.: Complete genome determination and analysis of Acholeplasma oculi strain 19L, highlighting the loss of basic genetic features in the Acholeplasmataceae. BMC Genomics 15, 931 (2014)
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Steffens, A.; Jaegle, B.; Tresch, A.; Huelskamp, M.; Jakoby, M.: Processing-Body Movement in Arabidopsis Depends on an Interaction between Myosins and DECAPPING PROTEIN1([W]). Plant Physiology 164 (4), pp. 1879 - 1892 (2014)
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Strijkstra, A.; Trautwein, K.; Jarling, R.; Woehlbrand, L.; Doerries, M.; Reinhardt, R.; Drozdowska, M.; Golding, B. T.; Wilkes, H.; Rabus, R.: Anaerobic Activation of p-Cymene in Denitrifying Betaproteobacteria: Methyl Group Hydroxylation versus Addition to Fumarate. Applied and Environmental Microbiology 80 (24), pp. 7592 - 7603 (2014)
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Suáerez-López, P.; Tsuji, H.; Coupland, G.: A tribute to Ko Shimamoto (1949–2013). Journal of Experimental Botany 64 (22), pp. 6755 - 6759 (2014)
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Sueldo, D.; Ahmed, A.; Misas-Villamil, J.; Colby, T.; Tameling, W.; Joosten, M. H. A. J.; Van der Hoorn, R. A. L.: Dynamic hydrolase activities precede hypersensitive tissue collapse in tomato seedlings. New Phytologist 203 (3), pp. 913 - 925 (2014)
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Tiburcio, A. F.; Altabella, T.; Bitrián Satorra, M.; Alcázar, R.: The roles of polyamines during the lifespan of plants: from development to stress. Planta 240 (1), pp. 1 - 18 (2014)
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Tine, M.; Kuhl, H.; Gagnaire, P.-A.; Louro, B.; Desmarais, E.; Martins, R. S. T.; Hecht, J.; Knaust, F.; Belkhir, K.; Klages, S. et al.; Dieterich, R.; Stueber, K.; Piferrer, F.; Guinand, B.; Bierne, N.; Volckaert, F. A. M.; Bargelloni, L.; Power, D. M.; Bonhomme, F.; Canario, A. V. M.; Reinhardt, R.: \European sea bass genome and its variation provide insights into adaptation to euryhalinity and speciation. Nature Communications 5, 5770 (2014)
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Tintor, N.; Saijo, Y.: ER-mediated control for abundance, quality, and signaling of transmembrane immune receptors in plants. Frontiers in Plant Science 5, 65 (2014)
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Tomanov, K.; Zeschmann, A.; Hermkes, R.; Eifler, K.; Ziba, I.; Grieco, M.; Novatchkova, M.; Hofmann, K.; Hesse, H.; Bachmair, A.: Arabidopsis PIAL1 and 2 Promote SUMO Chain Formation as E4-Type SUMO Ligases and Are Involved in Stress Responses and Sulfur Metabolism. The Plant Cell 26 (11), pp. 4547 - 4560 (2014)
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Turck, F.; Coupland, G.: NATURAL VARIATION IN EPIGENETIC GENE REGULATION AND ITS EFFECTS ON PLANT DEVELOPMENTAL TRAITS. Evolution 68 (3), pp. 620 - 631 (2014)
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van Zanten, M.; Zöll, C.; Wang, Z.; Philipp, C.; Carles, A.; Li, Y.; Kornet, N. G.; Lui, Y.; Soppe, W. J. J.: HISTONE DEACETYLASE 9 represses seedling traits in Arabidopsis thaliana dry seeds. The Plant Journal 80 (3), pp. 475 - 488 (2014)
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Villajuana Bonequi, M.; Elrouby, N.; Nordstroem, K.; Griebel, T.; Bachmair, A.; Coupland, G.: Elevated salicylic acid levels conferred by increased expression of ISOCHORISMATE SYNTHASE 1 contribute to hyperaccumulation of SUMO1 conjugates in the Arabidopsis mutant early in short days 4. The Plant Journal 79 (2), pp. 206 - 219 (2014)
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Vlad, D.; Kierzkowski, D.; Rast, M. I.; Vuolo, F.; Dello Ioio, R.; Galinha, C.; Gan, X.; Hajheidari, M.; Hay, A.; Smith, R. S. et al.; Huijser, P.; Bailey, C. D.; Tsiantis, M.: Leaf Shape Evolution Through Duplication, Regulatory Diversification, and Loss of a Homeobox Gene. Science 343 (6172), pp. 780 - 783 (2014)
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Wang, Q.; Kohlen, W.; Rossmann, S.; Vernoux, T.; Theres, K.: Auxin Depletion from the Leaf Axil Conditions Competence for Axillary Meristem Formation in Arabidopsis and Tomato. The Plant Cell 26 (5), pp. 2068 - 2079 (2014)
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Wang, Y.; Kwon, S. J.; Wu, J.; Choi, J.; Lee, Y.-H.; Agrawal, G. K.; Tamogami, S.; Rakwal, R.; Park, S.-R.; Kim, B.-G. et al.; Jung, K.-H.; Kang, K. Y.; Kim, S. G.; Kim, S. T.: Transcriptome Analysis of Early Responsive Genes in Rice during Magnaporthe oryzae Infection. Plant Pathology Journal 30 (4), pp. 343 - 354 (2014)
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Wasmund, K.; Algora, C.; Müller, J.; Krüger, M.; Lloyd, K.G.; Reinhardt, R.; Adrian, L.: Development and application of primers for the class Dehalococcoidia (phylum Chloroflexi) enables deep insights into diversity and stratification of subgroups in the marine subsurface. Environmental Microbiology, 10.1111/1462-2920.12510 (2014)
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Weßling, R.; Epple, P.; Altmann, S.; He, Y.; Yang, L.; Henz, S. R.; McDonald, N.; Wiley, K.; Bader, K. C.; Glaesser, C. et al.; Mukhtar, M. S.; Haigis, S.; Ghamsari, L.; Stephens, A. E.; Ecker, J. R.; Vidal, M.; Jones, J. D. G.; Mayer, K. F. X.; Ver Loren van Themaat, E.; Weigel, D.; Schulze-Lefert, P.; Dangl, J. L.; Panstruga, R.; Braun, P.: Convergent Targeting of a Common Host Protein-Network by Pathogen Effectors from Three Kingdoms of Life. Cell Host & Microbe 16 (3), pp. 364 - 375 (2014)
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Williams, S. J.; Sohn, K. H.; Wan, L.; Bernoux, M.; Sarris, P. F.; Segonzac, C.; Ve, T.; Ma, Y.; Saucet, S. B.; Ericsson, D. J. et al.; Casey, L. W.; Lonhienne, T.; Winzor, D. J.; Zhang, X.; Coerdt, A.; Parker, J. E.; Dodds, P. N.; Kobe, B.; Jones, J. D. G.: Structural Basis for Assembly and Function of a Heterodimeric Plant Immune Receptor. Science 344 (6181), pp. 299 - 303 (2014)
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Wittek, F.; Hoffmann, T.; Kanawati, B.; Bichlmeier, M.; Knappe, C.; Wenig, M.; Schmitt-Kopplin, P.; Parker, J. E.; Schwab, W.; Vlot, A. C.: Arabidopsis ENHANCED DISEASE SUSCEPTIBILITY1 promotes systemic acquired resistance via azelaic acid and its precursor 9-oxo nonanoic acid. Journal of Experimental Botany 65 (20), pp. 5919 - 5931 (2014)
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Wu, J.; Lee, D. Y.; Wang, Y.; Kim, S. T.; Baek, S.-B.; Kim, S. G.; Kang, K. Y.: Protein profiles secreted from phylloplane of rice leaves free from cytosolic proteins: Application to study rice-Magnaporthe Oryzae interactions. Physiological and Molecular Plant Pathology 88, pp. 28 - 35 (2014)
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Xiang, Y.; Nakabayashi, K.; Ding, J.; He, F.; Bentsink, L.; Soppe, W. J. J.: REDUCED DORMANCY5 Encodes a Protein Phosphatase 2C That Is Required for Seed Dormancy in Arabidopsis. The Plant Cell 26 (11), pp. 4362 - 4375 (2014)
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Yoshida, S.; Barbier de Reuille, P.; Lane, B.; Bassel, G. W.; Prusinkiewicz, P.; Smith, R. S.; Weijers, D.: Genetic Control of Plant Development by Overriding a Geometric Division Rule. Developmental Cell 29 (1), pp. 75 - 87 (2014)
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Zacher, B.; Lidschreiber, M.; Cramer, P.; Gagneur, J.; Tresch, A.: Annotation of genomics data using bidirectional hidden Markov models unveils variations in Pol II transcription cycle. MOLECULAR SYSTEMS BIOLOGY 10 (12), 768 (2014)
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Zee, P. C.; Mendes-Soares, H.; Yu, Y.-T. N.; Kraemer, S. A.; Keller, H.; Ossowski, S.; Schneeberger, K.; Velicer, G. J.: A SHIFT FROM MAGNITUDE TO SIGN EPISTASIS DURING ADAPTIVE EVOLUTION OF A BACTERIAL SOCIAL TRAIT. EVOLUTION 68 (9), pp. 2701 - 2708 (2014)
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Zhang, B.; Tremousaygue, D.; Denance, N.; van Esse, H. P.; Hoerger, A. C.; Dabos, P.; Goffner, D.; Thomma, B. P. H. J.; Van der Hoorn, R. A. L.; Tuominen, H.: PIRIN2 stabilizes cysteine protease XCP2 and increases susceptibility to the vascular pathogen Ralstonia solanacearum in Arabidopsis. The Plant Journal 79 (6), pp. 1009 - 1019 (2014)
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Zhang, P.; Liu, X.; Tong, H.; Lu, Y.; Li, J. Q.: Association Mapping for Important Agronomic Traits in Core Collection of Rice (Oryza sativa L.) with SSR Markers. PLoS One 9 (10), e111508 (2014)
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Abdel-Ghani, A. H.; Frey, F. P.; Parzies, H. K.: Effect of temperature on the expression of cytoplasmic male sterility in cultivated barley (Hordeum vulgare L.). Plant Breeding 132 (1), pp. 42 - 47 (2013)
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Acevedo Garcia, J.; Collins, N. C.; Ahmadinejad, N.; Ma, L.; Houben, A.; Bednarek, P.; Benjdia, M.; Freialdenhoven, A.; Altmueller, J.; Nuernberg, P. et al.; Reinhardt, R.; Schulze-Lefert, P.; Panstruga, R.: Fine mapping and chromosome walking towards the Ror1 locus in barley (Hordeum vulgare L.). Theoretical and Applied Genetics 126 (12), pp. 2969 - 2982 (2013)
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Anwer, M. U.; Davis, S. J.: An overview of natural variation studies in the Arabidopsis thaliana circadian clock. Seminars in Cell & Developmental Biology 24 (5), pp. 422 - 429 (2013)
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Archacki, R.; Buszewicz, D.; Sarnowski, T. J.; Sarnowska, E.; Rolicka, A. T.; Tohge, T.; Fernie, A. R.; Jikumaru, Y.; Kotlinski, M.; Iwanicka-Nowicka, R. et al.; Kalisiak, K.; Patryn, J.; Halibart-Puzio, J.; Kamiya, Y.; Davis, S. J.; Koblowska, M. K.; Jerzmanowski, A.: BRAHMA ATPase of the SWI/SNF Chromatin Remodeling Complex Acts as a Positive Regulator of Gibberellin-Mediated Responses in Arabidopsis. PLoS One 8 (3), e58588 (2013)
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Barboza, L.; Effgen, S.; Alonso-Blanco, C.; Kooke, R.; Keurentjes, J. J. B.; Koornneef, M.; Alcázar, R.: Arabidopsis semidwarfs evolved from independent mutations in GA20ox1, ortholog to green revolution dwarf alleles in rice and barley. Proceedings of the National Academy of Sciences of the United States of America 110 (39), pp. 15818 - 15823 (2013)
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Benke, A.; Urbany, C.; Marsian, J.; Rongli, S.; von Wiren, N.; Stich, B.: The genetic basis of natural variation for iron homeostasis in the maize IBM population. BMC Plant Biology 14 (12), doi:10.1186/1471-2229-14-12 (2013)
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Benstein, R. M.; Ludewig, K.; Wulfert, S.; Wittek, S.; Gigolashvili, T.; Frerigmann, H.; Gierth, M.; Flügge, U.-I.; Krüger, S.: Arabidopsis phosphoglycerate dehydrogenase1 of the phosphoserine pathway is essential for development and required for ammonium assimilation and tryptophan biosynthesis. The Plant Cell 25, pp. 5011 - 5029 (2013)
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Bergonzi, S.; Albani, M.; Ver Loren van Themaat, E.; Nordstroem, K.; Wang, R.; Schneeberger, K.; Moerland, P. D.; Coupland, G.: Mechanisms of Age-Dependent Response to Winter Temperature in Perennial Flowering of Arabis alpina. Science 340 (6136), pp. 1094 - 1097 (2013)
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Bujdoso, N.; Davis, S. J.: Mathematical modeling of an oscillating gene circuit to unravel the circadian clock network of Arabidopsis thaliana. Frontiers in Plant Science 4, 3 (2013)
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Campoli, C.; Pankin, A.; Drosse, B.; Casao, C. M.; Davis, S. J.; von Korff, M.: HvLUX1 is a candidate gene underlying the early maturity 10 locus in barley: phylogeny, diversity, and interactions with the circadian clock and photoperiodic pathways. New Phytologist 199 (4), pp. 1045 - 1059 (2013)
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Chang, C.; Yu, D.; Jiao, J.; Jing, S.; Schulze-Lefert, P.; Shen, Q.-H.: Barley MLA Immune Receptors Directly Interfere with Antagonistically Acting Transcription Factors to Initiate Disease Resistance Signaling. The Plant Cell 25 (3), pp. 1158 - 1173 (2013)
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Chitwood, D. H.; Kumar, R.; Headlanda, L. R.; Ranjan, A.; Covington, M. F.; Ichihashi, Y.; Fulop, D.; Jiménez-Gómez, J. M.; Peng, J.; Maloof, J. N. et al.; Sinha, R.: A Quantitative Genetic Basis for Leaf Morphology in a Set of Precisely Defined Tomato Introgression Lines. The Plant Cell 25 (7), pp. 2465 - 2481 (2013)
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Cromer, L.; Jolivet, S.; Horlow, C.; Chelysheva, L.; Heyman, J.; De Jaeger, G.; Koncz, C.; De Veylder, L.; Mercier, R.: Centromeric Cohesion Is Protected Twice at Meiosis, by SHUGOSHINs at Anaphase 1 and by PATRONUS at Interkinesis. Current Biology 23 (21), pp. 2090 - 2099 (2013)
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Debieu, M.; Tang, C.; Stich, B.; Sikosek, T.; Effgen, S.; Josephs, E.; Schmitt, J.; Nordborg, M.; Koornneef, M.; de Meaux, J.: Co-Variation between Seed Dormancy, Growth Rate and Flowering Time Changes with Latitude in Arabidopsis thaliana. PLOS ONE 8 (5), e61075 (2013)
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Delaunois, B.; Colby, T.; Belloy, N.; Conreux, A.; Harzen, A.; Baillieul, F.; Clement, C.; Schmidt, J.; Jeandet, P.; Cordelier, S.: Large-scale proteomic analysis of the grapevine leaf apoplastic fluid reveals mainly stress-related proteins and cell wall modifying enzymes. BMC PLANT BIOLOGY 13, 24 (2013)
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Draffehn, A.; Li, L.; Krezdorn, N.; Ding, J.; Luebeck, J.; Strahwald, J.; Muktar, M. S.; Walkemeier, B.; Rotter, B.; Gebhardt, C.: Comparative transcript profiling by SuperSAGE identifies novel candidate genes for controlling potato quantitative resistance to late blight not compromised by late maturity. FRONTIERS IN PLANT SCIENCE 4, 423 (2013)
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Dugar, G.; Herbig, A.; Förstner, K. U.; Heidrich, N.; Reinhardt, R.; Nieselt, K.; Sharma, C.: High-Resolution Transcriptome Maps Reveal Strain-Specific Regulatory Features of Multiple Campylobacter jejuni Isolates. PLoS Genetics 9 (5), e1003495 (2013)
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Elrouby, N.; Villajuana Bonequi, M.; Porri, A.; Coupland, G.: Identification of Arabidopsis SUMO-interacting proteins that regulate chromatin activity and developmental transitions. Proceedings of the National Academy of Sciences of the United States of America 110 (49), pp. 19956 - 19961 (2013)
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