Scientific Publications since 2002 | Max Planck Institute for Plant Breeding Research

Max Planck Institute for Plant Breeding Research

Journal Article (2291)

Journal Article

Duemcke, S.; Seizl, M.; Etzold, S.; Pirkl, N.; Martin, D.; Cramer, P.; Tresch, A.: One Hand Clapping: detection of condition-specific transcription factor interactions from genome-wide gene activity data. Nucleic Acids Research (London) 40 (18), pp. 8883 - 8892 (2012)

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Elrouby, N.; Bureau, T. E.: Modulation of AUXIN-BINDING PROTEIN 1 gene expression in maize and the teosintes by transposon insertions in its promoter. Molecular and General Genetics 287 (2), pp. 143 - 153 (2012)

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Engelhorn, J.; Reimer, J. J.; Leuz, I.; Goebel, U.; Huettel, B.; Farrona, S.; Turck, F.: DEVELOPMENT-RELATED PcG TARGET IN THE APEX 4 controls leaf margin architecture in Arabidopsis thaliana. Development 139 (14), pp. 2566 - 2575 (2012)

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Ernst, A. M.; Jekat, S. B.; Zielonka, S.; Mueller, B.; Neumann, U.; Rueping, B.; Twyman, R. M.; Krzyzanek, V.; Pruefer, D.; Noll, G. A.: Sieve element occlusion (SEO) genes encode structural phloem proteins involved in wound sealing of the phloem. Proceedings of the National Academy of Sciences of the United States of America 109 (28), pp. E1980 - E1989 (2012)

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Faure, S.; Turner, A. S.; Gruszka, D.; Christodoulou, V.; Davis, S. J.; von Korff, M.; Laurie, D. A.: Mutation at the circadian clock gene EARLY MATURITY 8 adapts domesticated barley (Hordeum vulgare) to short growing seasons. Proceedings of the National Academy of Sciences of the United States of America 109 (21), pp. 8328 - 8333 (2012)

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Fernandez Tiburcio, A.; Wollenweber, B.; Zilberstein, A.; Koncz, C.: Abiotic stress tolerance. PLANT SCIENCE 182, pp. 1 - 2 (2012)

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Frei Dit Frey, N.; Mbengue, M.; Kwaaitaal, M.; Nitsch, L.; Altenbach, D.; Haeweker, H.; Lozano-Duran, R.; Njo, M. F.; Beeckman, T.; Huettel, B. et al.; Borst, J. W.; Panstruga, R.; Robatzek, S.: Plasma Membrane Calcium ATPases Are Important Components of Receptor-Mediated Signaling in Plant Immune Responses and Development. Plant Physiology 159 (2), pp. 798 - + (2012)

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Fritsche , G.; Wang, X.; Li, J.; Stich, B.; Kopisch-Obuch, F.; Endrigkeit, J.; Frauen, M.; Friedt, W.; Meng, J.; Jung, C.: A candidate gene based association study of tocopherol content and composition in rapeseed (Brassica napus). Frontiers in Plant Genetics and Genomics 3, 129 (2012)

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Galvao, V. C.; Nordstroem, K.; Lanz, C.; Sulz, P.; Mathieu, J.; Pose, D.; Schmid, M.; Weigel, D.; Schneeberger, K.: Synteny-based mapping-by-sequencing enabled by targeted enrichment. The Plant Journal 71 (3), pp. 517 - 526 (2012)

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Geay, F.; Zambonino-Infante, J.; Reinhardt, R.; Kuhl, H.; Santigosa, E.; Cahu, C.; Mazurais, D.: Characteristics of fads2 gene expression and putative promoter in European sea bass (Dicentrarchus labrax): Comparison with salmonid species and analysis of CpG methylation. MARINE GENOMICS 5, pp. 7 - 13 (2012)

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Gigolashvili, T.; Geier, M.; Ashykhmina, N.; Frerigmann, H.; Wulfert, S.; Krueger, S.; Mugford, S. G.; Kopriva, S.; Haferkamp, I.; Flügge, U.-I.: The Arabidopsis Thylakoid ADP/ATP Carrier TAAC Has an Additional Role in Supplying Plastidic Phosphoadenosine 5′-Phosphosulfate to the Cytosol. The Plant Cell 24, pp. 4187 - 4204 (2012)

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Graeber, K.; Nakabayashi, K.; Miatton, E.; Leubner-Metzger, G.; Soppe, W. J. J.: Molecular mechanisms of seed dormancy. Plant, Cell and Environment 35 (10), pp. 1769 - 1786 (2012)

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Griebel, T.; Lapin, D.; Locci, F.; Kracher, B.; Bautor, J.; Concia, L.; Benhamed, M.; Parker, J. E.: Arabidopsis Topless-related 1 mitigates physiological damage and growth penalties of induced immunity. New Phytologist (2012)

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Groscurth, S.; Mueller, B.; Schwan, S.; Menzel, M.; Diekstall, F.; Senft, M.; Kendall, A.; Kommor, B. A.; Neumann, U.; Kalischuk, M. et al.; Kawchuk, L. M.; Krzyzanek, V.; Heilmann, A.; Stubbs, G.; Twyman, R. M.; Pruefer, D.; Noll, G. A.: Artificial Forisomes Are Ideal Models of Forisome Assembly and Activity That Allow the Development of Technical Devices. Biomacromolecules 13 (10), pp. 3076 - 3086 (2012)

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Gu, C.; Shabab, M.; Strasser, R.; Wolters, P. J.; Shindo, T.; Niemer, M.; Kaschani, F.; Mach, L.; Van der Hoorn, R. A. L.: Post-Translational Regulation and Trafficking of the Granulin-Containing Protease RD21 of Arabidopsis thaliana. PLoS One 7 (3), e32422 (2012)

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Gyetvai, G.; Sonderkaer, M.; Goebel, U.; Basekow, R.; Ballvora, A.; Imhoff, M.; Kersten, B.; Nielsen, K.; Gebhardt, C.: The Transcriptome of Compatible and Incompatible Interactions of Potato (Solanum tuberosum) with Phytophthora infestans Revealed by DeepSAGE Analysis. PLoS One 7 (2), e31526 (2012)

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Hajheidrai, M.; Farrona, S.; Huettel, B.; Koncz, Z.; Koncz, C.: CDKF;1 and CDKD Protein Kinases Regulate Phosphorylation of Serine Residues in the C-Terminal Domain of Arabidopsis RNA Polymerase II. Plant Cell 24 (4), pp. 1626 - 1642 (2012)

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Hartwig, B.; James, G. V.; Konrad, K.; Schneeberger, K.; Turck, F.: Fast Isogenic Mapping-by-Sequencing of Ethyl Methanesulfonate-Induced Mutant Bulks. Plant Physiology 160 (2), pp. 591 - 600 (2012)

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He, F.; Zhang, X.; Hu, J. Y.; Turck, F.; Dong, X.; Goebel, U.; Borevitz, J.; de Meaux, J.: Widespread interspecific divergence in cis-regulation of transposable elements in the Arabidopsis genus. Molecular Biology & Evolution 29, pp. 1081 - 1091 (2012)

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He, F.; Zhang, X.; Hu, J.; Turck, F.; Dong, X.; Goebel, U.; Borevitz, J.; de Meaux, J.: Genome-wide Analysis of Cis-regulatory Divergence between Species in the Arabidopsis Genus. Molecular Biology and Evolution 29 (11), pp. 3385 - 3395 (2012)

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Heidrich, K.; Blanvillain-Baufumé, S.; Parker, J. E.: Molecular and spatial constraints on NB-LRR receptor signaling. Current Opinion in Plant Biology 15 (4), pp. 385 - 391 (2012)

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Herrero, E.; Davis, S. J.: Time for a Nuclear Meeting: Protein Trafficking and Chromatin Dynamics Intersect in the Plant Circadian System. Molecular Plant 5 (3), pp. 554 - 565 (2012)

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Herrero, E.; Kolmos, E.; Bujdoso, N.; Yuan, Y.; Wang, M.; Berns, M. C.; Uhlworm, H.; Coupland, G.; Saini, R.; Jaskolski, M. et al.; Webb, A.; Goncalves, J.; Davis, S. J.: EARLY FLOWERING4 Recruitment of EARLY FLOWERING3 in the Nucleus Sustains the Arabidopsis Circadian Clock. Plant Cell 24 (2), pp. 428 - 443 (2012)

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Hoerger, A. C.; Ilyas, M.; Stephan, W.; Tellier, A.; Van der Hoorn, R. A. L.; Rose, L. E.: Balancing Selection at the Tomato RCR3 Guardee Gene Family Maintains Variation in Strength of Pathogen Defense. PLoS Genetics 8 (7), e1002813 (2012)

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Huang, X.; Effgen, S.; Meyer, R. C.; Theres, K.; Koornneef, M.: Epistatic Natural Allelic Variation Reveals a Function of AGAMOUS-LIKE6 in Axillary Bud Formation in Arabidopsis. Plant Cell 24 (6), pp. 2364 - 2379 (2012)

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Karl, R.; Kiefer, C.; Ansell, S. W.; Koch, M. A.: SYSTEMATICS AND EVOLUTION OF ARCTIC-ALPINE ARABIS ALPINA (BRASSICACEAE) AND ITS CLOSEST RELATIVES IN THE EASTERN MEDITERRANEAN. American Journal of Botany 99 (4), pp. 778 - 794 (2012)

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Kaschani, F.; Clerc, J.; Krahn, D.; Bier, D.; Hong, T. N.; Ottmann, C.; Niessen, S.; Colby, T.; Van der Hoorn, R. A. L.; Kaiser, M.: Identification of a Selective, Activity-Based Probe for Glyceraldehyde 3-Phosphate Dehydrogenases. Angewandte Chemie-International Edition in English 51 (21), pp. 5230 - 5233 (2012)

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Kaschani, F.; Nickel, S.; Pandey, B.; Cravatt, B. F.; Kaiser, M.; Van der Hoorn, R. A. L.: Selective inhibition of plant serine hydrolases by agrochemicals revealed by competitive ABPP. Bioorganic & Medicinal Chemistry 20 (2), pp. 597 - 600 (2012)

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Khan, M. R.; Hu, J. Y.; Ali, G. M.: Reciprocal Loss of CArG-Boxes and Auxin Response Elements Drives Expression Divergence of MPF2-Like MADS-Box Genes Controlling Calyx Inflation. PLoS One 7 (8), e42781 (2012)

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Khan, M. R.; Hu, J. Y.; He, C.: Plant hormones including ethylene are recruited in calyx inflation in Solanaceous plants. Journal of Plant Physiology 169 (10), pp. 940 - 948 (2012)

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Kiefer, C.; Koch, M. A.: A Continental-Wide Perspective: The Genepool of Nuclear Encoded Ribosomal DNA and Single-Copy Gene Sequences in North American Boechera (Brassicaceae). PLoS One 7 (5), e36491 (2012)

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Kim, J. J.; Lee, J. H.; Kim, W.; Jung, H. S.; Huijser, P.; Ahn, J. H.: The microRNA156-SQUAMOSA PROMOTER BINDING PROTEIN-LIKE3 Module Regulates Ambient Temperature-Responsive Flowering via FLOWERING LOCUS T in Arabidopsis. Plant Physiology 159 (1), pp. 461 - 478 (2012)

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Kim, T.-H.; Kunz, H.-H.; Bhattacharjee, S.; Hauser, F.; Park, J.; Engineer, C.; Liu, A.; Ha, T.; Parker, J. E.; Gassmann, W. et al.; Schroeder, J. I.: Natural Variation in Small Molecule–Induced TIR-NB-LRR Signaling Induces Root Growth Arrest via EDS1- and PAD4-Complexed R Protein VICTR in Arabidopsis. The Plant Cell (24), tpc.112.107235 , pp. 5177 - 5192 (2012)

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Klasen, J. R.; Piepho, H.-P.; Stich, B.: QTL detection power of multi-parent RIL populations of Arabidopsis thaliana. Heredity 108, pp. 626 - 632 (2012)

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Kleemann, J.; Rincon Rivera, L. J.; Takahara, H.; Neumann, U.; Ver Loren van Themaat, E.; van der Does, H. C.; Hacquard, S.; Stueber, K.; Will, I.; Schmalenbach, W. et al.; Schmelzer, E.; O'Connell, R. J.: Sequential Delivery of Host-Induced Virulence Effectors by Appressoria and Intracellular Hyphae of the Phytopathogen Colletotrichum higginsianum. PLoS Pathogens 8 (4), e1002643 (2012)

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Kleppe, L.; Edvardsen, R. B.; Kuhl, H.; Malde, K.; Furmanek, T.; Drivenes, O.; Reinhardt, R.; Taranger, G. L.; Wargelius, A.: Maternal 3 ' UTRs: from egg to onset of zygotic transcription in Atlantic cod. BMC Genomics 13, 443 (2012)

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Koerber, N.; Wittkop, B.; Bus, A.; Friedt, W.; Snowdon, R. J.; Stich, B.: Seedling development in a Brassica napus diversity set and its relationship to agronomic performance. Theoretical and Applied Genetics 125 (6), pp. 1275 - 1287 (2012)

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Kohlen, W.; Charnikhova, T.; Lammers, M.; Pollina, T.; Toth, P.; Haider, I.; Pozo, M. J.; de Maagd, R. A.; Ruyter-Spira, C.; Bouwmeester, H. J. et al.; Lopez-Raez, J. A.: The tomato CAROTENOID CLEAVAGE DIOXYGENASE8 (SlCCD8) regulates rhizosphere signaling, plant architecture and affects reproductive development through strigolactone biosynthesis. New Phytologist 196 (2), pp. 535 - 547 (2012)

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Kombrink, E.: Chemical and genetic exploration of jasmonate biosynthesis and signaling paths. Planta 236 (5), pp. 1351 - 1366 (2012)

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Koncz, C.; de Jong, F.; Fernandez Villacorta, N.; Szakonyi, D.; Koncz, Z.: The spliceosome-activating complex: molecular mechanisms underlying the function of a pleiotropic regulator. Frontiers in Plant Physiology, doi: 10.3389/fpls.2012.00009 (2012)

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Koornneef, M.: My favourite flowering image. Journal of Experimental Botany 64, doi: 10.1093/jxb/err413, pp. 5801 - 5803 (2012)

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Körber, N.; Wittkopp, B.; Bus, A.; Snowdon, R.; Friedt, W.; Stich, B.: Seedling development in a Brassica napus diversity set and its relation to agronomic performance. Theoretical and Applied Genetics 125, pp. 1275 - 1287 (2012)

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Koskela, E. A.; Mouhu, K.; Albani, M.; Kurokura, T.; Rantanen, M.; Sargent, D.; Battey, N. H.; Coupland, G.; Elomaa, P.; Hytonen, T.: Mutation in TERMINAL FLOWER1 Reverses the Photoperiodic Requirement for Flowering in the Wild Strawberry Fragaria vesca. Plant Physiology 159 (3), pp. 1043 - 1054 (2012)

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Krapp, F.; Woehrmann, T.; de Barros Pinange, D. S.; Benko-Iseppon, A. M.; Huettel, B.; Weising, K.: A set of plastid microsatellite loci for the genus Dyckia (Bromeliaceae) derived from 454 pyrosequencing. American Journal of Botany 99 (12), pp. E470 - E473 (2012)

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Kroenlein, H.; Schwartz, S.; Reinhardt, R.; Rieder, H.; Molkentin, M.; Goekbuget, N.; Hoelzer, D.; Thiel, E.; Burmeister, T.: Molecular analysis of the t(2;8)/MYC-IGK translocation in high-grade lymphoma/leukemia by long-distance inverse PCR. GENES CHROMOSOMES & CANCER 51 (3), pp. 290 - 299 (2012)

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Kronholm, I.; Xavier Pico, F.; Alonso-Blanco, C.; Goudet, J.; de Meaux, J.: GENETIC BASIS OF ADAPTATION IN ARABIDOPSIS THALIANA: LOCAL ADAPTATION AT THE SEED DORMANCY QTL DOG1. Evolution 66 (7), pp. 2287 - 2302 (2012)

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Kwaaitaal, M.; Maintz, J.; Cavdar, M.; Panstruga, R.: On the ligand binding profile and desensitization of plant ionotropic glutamate receptor (iGluR)-like channels functioning in MAMP-triggered Ca2+ influx. Plant Signaling & Behavior 7, pp. 1373 - 1377 (2012)

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Kwantes, M.; Liebsch, D.; Verelst, W.: How MIKC* MADS-Box Genes Originated and Evidence for Their Conserved Function Throughout the Evolution of Vascular Plant Gametophytes. Molecular Biology and Evolution 29 (1), pp. 293 - 302 (2012)

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Lahme, S.; Eberlein, C.; Jarling, R.; Kube, M.; Boll, M.; Wilkes, H.; Reinhardt, R.; Rabus, R.: Anaerobic degradation of 4-methylbenzoate via a specific 4-methylbenzoyl-CoA pathway. Environmental Microbiology 14 (5), pp. 1118 - 1132 (2012)

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Lebeis, S. L.; Rott, M.; Dangl, J. L.; Schulze-Lefert, P.: Culturing a plant microbiome community at the cross-Rhodes. New Phytologist 196 (2), pp. 341 - 344 (2012)

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