Publications of B. Stich

Journal Article (60)

2024
Journal Article
Bonthala, V. S.; Stich, B.: StCoExpNet: a global co-expression network analysis facilitates identifying genes underlying agronomic traits in potatoes. Plant Cell Reports 43 (5), 117 (2024)
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Cosenza, F.; Shrestha, A.; Van Inghelandt, D.; Casale, F. A.; Wu, P.-Y.; Weisweiler, M.; Li, J. Q.; Wespel, F.; Stich, B.: Genetic mapping reveals new loci and alleles for flowering time and plant height using the double round-robin population of barley. Journal of Experimental Botany 75 (8), pp. 2385 - 2402 (2024)
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2023
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Arlt, C.; Wachtmeister, T.; Koehrer, K.; Stich, B.: Affordable, accurate and unbiased RNA sequencing by manual library miniaturization: A case study in barley. Plant Biotechnology Journal 21 (11), pp. 2241 - 2253 (2023)
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Guerreiro, R.; Bonthala, V. S.; Schlueter, U.; Hoang, N. V.; Triesch, S.; Schranz, M. E.; Weber, A. P. M.; Stich, B.: A genomic panel for studying C3-C4 intermediate photosynthesis in the Brassiceae tribe. Plant, Cell and Environment (2023)
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Weisweiler, M.; Stich, B.: Benchmarking of structural variant detection in the tetraploid potato genome using linked-read sequencing. Genomics 115 (2), 110568 (2023)
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Wu, P.Y.; Stich, B.; Renner, J.; Muders, K.; Prigge, V.; van Inghelandt, D.: Optimal implementation of genomic selection in clone breeding programs-Exemplified in potato: I. Effect of selection strategy, implementation stage, and selection intensity on short-term genetic gain. The Plant Genome 16 (2), e20327 (2023)
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2022
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Bonthala, V. S.; Stich, B.: Genetic Divergence of Lineage-Specific Tandemly Duplicated Gene Clusters in Four Diploid Potato Genotypes. Frontiers in Plant Science 13, 875202 (2022)
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Casale, F.; Van Inghelandt, D.; Weisweiler, M.; Li, J. Q.; Stich, B.: Genomic prediction of the recombination rate variation in barley - A route to highly recombinogenic genotypes. Plant Biotechnology Journal 20, pp. 676 - 690 (2022)
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Schneider, M.; Casale, F.; Stich, B.: Accurate recombination estimation from pooled genotyping and sequencing: a case study on barley. BMC Genomics 23 (1), 468 (2022)
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Shrestha, A.; Cosenza, F.; van Inghelandt, D.; Wu, P.-Y.; Li, J.; Casale, F. A.; Weisweiler, M.; Stich, B.: The double round-robin population unravels the genetic architecture of grain size in barley. Journal of Experimental Botany, pp. 7344 - 7361 (2022)
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2021
Journal Article
Freire, R.; Weisweiler, M.; Guerreiro, R.; Baig, N.; Huettel, B.; Obeng-Hinneh, E.; Renner, J.; Hartje, S.; Muders, K.; Truberg, B. et al.; Rosen, A.; Prigge, V.; Bruckmueller, J.; Luebeck, J.; Stich, B.: Chromosome-scale reference genome assembly of a diploid potato clone derived from an elite variety. G3: Genes, Genomes, Genetics 11 (12), jkab330 (2021)
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2020
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Stich, B.; Benke, A.; Schmidt, M.; Urbany, C.; Shi, R.; von Wiren, N.: The maize shoot ionome: Its interaction partners, predictive power, and genetic determinants. Plant, Cell and Environment (2020)
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2019
Journal Article
Inghelandt, D. v.; Frey, F. P.; Ries, D.; Stich, B.: QTL mapping and genome-wide prediction of heat tolerance in multiple connected populations of temperate maize. SCIENTIFIC REPORTS 9, 14418 (2019)
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2018
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Shi, R.; Melzer, M.; Zheng, S.; Benke, A.; Stich, B.; von Wiren, N.: Iron Retention in Root Hemicelluloses Causes Genotypic Variability in the Tolerance to Iron Deficiency-Induced Chlorosis in Maize. Frontiers in Plant Science 9, 557 (2018)
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2016
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Clarke, W. E.; Higgins, E. E.; Plieske, J.; Wieseke, R.; Sidebottom, C.; Khedikar, Y.; Batley, J.; Edwards, D.; Meng, J.; Li, R. et al.; Lawley, C. T.; Pauquet, J.; Laga, B.; Cheung, W.; Iniguez-Luy, F.; Dyrszka, E.; Rae, S.; Stich, B.; Snowdon, R.J.; Sharpe, A.G.; Ganal, M. W.; Parkin, I. A. P.: A high-density SNP genotyping array for Brassica napus and its ancestral diploid species based on optimised selection of single-locus markers in the allotetraploid genome. Theoretical and Applied Genetics 129 (10), pp. 1887 - 1899 (2016)
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Frey, F. P.; Presterl, T.; Lecoq, P.; Orlik, A.; Stich, B.: First steps to understand heat tolerance of temperate maize at adult stage: identification of QTL across multiple environments with connected segregating populations. Theoretical and Applied Genetics 129 (5), pp. 945 - 961 (2016)
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Körber, N.; Bus, A.; Li, J.; Parkin, I. A. P.; Wittkop, B.; Snowdon, R. J.; Stich, B.: Agronomic and Seed Quality Traits Dissected by Genome-Wide Association Mapping in Brassica napus. Frontiers in Plant Science 7, 386 (2016)
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Li, J.; Bus, A.; Spamer, V.; Stich, B.: Comparison of statistical models for nested association mapping in rapeseed (Brassica napus eL.) through computer simulations. BMC PLANT BIOLOGY 16, 26 (2016)
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2015
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Benke, A.; Urbany, C.; Stich, B.: Genome-wide association mapping of iron homeostasis in the maize association population. BMC GENETICS 16, 1 (2015)
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Frey, F. P.; Urbany, C.; Huettel, B.; Reinhardt, R.; Stich, B.: Genome-wide expression profiling and phenotypic evaluation of European maize inbreds at seedling stage in response to heat stress. BMC Genomics 16, 123 (2015)
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Horn, F.; Habekuss, A.; Stich, B.: Linkage mapping of Barley yellow dwarf virus resistance in connected populations of maize. BMC Plant Biology 15, 29 (2015)
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Körber, N.; Bus, A.; Li, J. Q.; Higgins, J.; Bancroft, I.; Higgins, E.E.; Parkin, I. A. P.; Salazar-Colqui, B.; Snowdon, R. J.; Stich, B.: Seedling development traits in Brassica napus examined by gene expression analysis and association mapping. BMC Plant Biology 15, UNSP 136 (2015)
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Rousselle, Y.; Jones, E.; Charcosset, A.; Moreau, P.; Robbins, K.; Stich, B.; Knaak, C.; Flament, P.; Karaman, Z.; Martinant, J.-P. et al.; Fourneau, M.; Taillardat, A.; Romestant, M.; Tabel, C.; Bertran, J.; Ranc, N.; Lespinasse, D.; Blanchard, P.; Kahler, A.; Chen, J.; Kahler, J.; Dobrin, S.; Warner, T.; Ferris, R.; Smith, S.: Study on Essential Derivation in Maize: III. Selection and Evaluation of a Panel of Single Nucleotide Polymorphism Loci for Use in European and North American Germplasm. Crop Science 55 (3), pp. 1170 - 1180 (2015)
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2014
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Bus, A.; Körber, N.; Parkin, I. A. P.; Samans, B.; Snowdon, R. J.; Li, J. Q.; Stich, B.: Species- and genome-wide dissection of the shoot ionome in Brassica napus and its relationship to seedling development. Frontiers in Plant Science 5, 485 (2014)
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Horn, F.; Habekuss, A.; Stich, B.: Genes involved in barley yellow dwarf virus resistance of maize. Theoretical and Applied Genetics 127 (12), pp. 2575 - 2584 (2014)
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2013
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Benke, A.; Urbany, C.; Marsian, J.; Rongli, S.; von Wiren, N.; Stich, B.: The genetic basis of natural variation for iron homeostasis in the maize IBM population. BMC Plant Biology 14 (12), doi:10.1186/1471-2229-14-12 (2013)
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Debieu, M.; Tang, C.; Stich, B.; Sikosek, T.; Effgen, S.; Josephs, E.; Schmitt, J.; Nordborg, M.; Koornneef, M.; de Meaux, J.: Co-Variation between Seed Dormancy, Growth Rate and Flowering Time Changes with Latitude in Arabidopsis thaliana. PLOS ONE 8 (5), e61075 (2013)
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Horn, F.; Habekuss, A.; Stich, B.: Natural variation for BYDV resistance in maize. Maydica 58 (2), pp. 173 - 181 (2013)
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Mueller, B. U.; Stich, B.; Piepho, H.-P.: Response to 'Controlling type 1 error rates in genome-wide association studies in plants' by Andrew W George. HEREDITY 111 (1), p. 88 - 88 (2013)
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Reimer, R.; Stich, B.; Melchinger, A. E.; Schrag, A. P.; Sorensen, P.; Stamp, P.; Hund, A.: Root response to temperature-extremes: an association mapping in temperate maize. Maydica 58 (2), pp. 156 - 168 (2013)
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Stich, B.; Urbany, C.; Hoffmann, P.; Gebhardt, C.: Population structure and linkage disequilibrium in diploid and tetraploid potato revealed by genome-wide high-density genotyping using the SolCAP SNP array. PLANT BREEDING 132 (6), pp. 718 - 724 (2013)
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Urbany, C.; Benke, A.; Marsian, J.; Huettel, B.; Reinhardt, R.; Stich, B.: Ups and downs of a transcriptional landscape shape iron deficiency associated chlorosis of the maize inbreds B73 and Mo17. BMC Plant Biology 13, 213 (2013)
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2012
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Bhosale, S. U.; Stich, B.; Rattunde, H. F. W.; Weltzien, E.; Haussmann, B. I. G.; Hash, C. T.; Ramu, P.; Cuevas, H. E.; Paterson, A. H.; Melchinger, A. E. et al.; Parzies, H. K.: Association analysis of photoperiodic flowering time genes in west and central African sorghum [Sorghum bicolor (L.) Moench]. BMC Plant Biology 12, 32 (2012)
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Bus, A.; Hecht, J.; Huettel, B.; Reinhardt, R.; Stich, B.: High-throughput polymorphism detection and genotyping in Brassica napus using next-generation RAD sequencing. BMC Genomics 13, 281 (2012)
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Fritsche , G.; Wang, X.; Li, J.; Stich, B.; Kopisch-Obuch, F.; Endrigkeit, J.; Frauen, M.; Friedt, W.; Meng, J.; Jung, C.: A candidate gene based association study of tocopherol content and composition in rapeseed (Brassica napus). Frontiers in Plant Genetics and Genomics 3, 129 (2012)
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Klasen, J. R.; Piepho, H.-P.; Stich, B.: QTL detection power of multi-parent RIL populations of Arabidopsis thaliana. Heredity 108, pp. 626 - 632 (2012)
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Körber, N.; Wittkopp, B.; Bus, A.; Snowdon, R.; Friedt, W.; Stich, B.: Seedling development in a Brassica napus diversity set and its relation to agronomic performance. Theoretical and Applied Genetics 125, pp. 1275 - 1287 (2012)
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Urbany, C.; Colby, T.; Stich, B.; Schmidt, L.; Schmidt, J.; Gebhardt, C.: Analysis of Natural Variation of the Potato Tuber Proteome Reveals Novel Candidate Genes for Tuber Bruising. Journal of Proteome Research 11 (2), pp. 703 - 716 (2012)
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Van Inghelandt, D.; Melchinger, A. E.; Martinant, J.-P.; Stich, B.: Genome-wide association mapping of flowering time and northern corn leaf blight (Setosphaeria turcica) resistance in a vast commercial maize germplasm set. BMC Plant Biology 12, 56 (2012)
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2011
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Benke, A.; Stich, B.: An analysis of selection on candidate genes for regulation, mobilization, uptake, and transport of iron in maize. GENOME 54 (8), pp. 674 - 683 (2011)
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Bhosale, S. U.; Stich, B.; Rattunde, H. F. W.; Weltzien, E.; Haussmann, B. I. G.; Hash, C. T.; Melchinger, A. E.; Parzies, H. K.: Population structure in sorghum accessions from West Africa differing in race and maturity class. Genetica 139 (4), pp. 453 - 463 (2011)
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Bus, A.; Koerber, N.; Snowdon, R.; Stich, B.: Patterns of molecular variation in a species-wide germplasm set of Brassica napus. THEORETICAL AND APPLIED GENETICS 123 (8), pp. 1413 - 1423 (2011)
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Gebhardt, C.; Urbany, C.; Li, L.; Stich, B.; Paulo, J.; Draffehn, A.; Ballvora, A.: Molecular Diagnostics for Complex Pest and Disease Resistance and Tuber Quality Traits: Concept, Achievements and Perspectives. POTATO RESEARCH 54 (4), pp. 313 - 318 (2011)
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Li, J. Q.; Luehmann, A.-K.; Weissleder, K.; Stich, B.: Genome-wide distribution of genetic diversity and linkage disequilibrium in elite sugar beet germplasm. BMC GENOMICS 12, 10.1186/1471-2164-12-484, p. 484 (2011)
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Muller, B. U.; Stich, B.; Piepho, H. P.: A general method for controlling the genome-wide type I error rate in linkage and association mapping experiments in plants. Heredity 106 (5), pp. 825 - 831 (2011)
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Stich, B.; Gebhardt, C.: Detection of epistatic interactions in association mapping populations: an example from tetraploid potato. Heredity 107, doi: 10.1038/hdy.2011.40, pp. 537 - 547 (2011)
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Urbany, C.; Stich, B.; Schmidt, L.; Simon, L.; Berding, H.; Junghans, H.; Niehoff, K. H.; Braun, A.; Tacke, E.; Hofferbert, H. R. et al.; Lubeck, J.; Strahwald, J.; Gebhardt, C.: Association genetics in Solanum tuberosum provides new insights into potato tuber bruising and enzymatic tissue discoloration. BMC Genomics 12, 7 (2011)
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2010
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El-Lithy, M. E.; Reymond, M.; Stich, B.; Koornneef, M.; Vreugdenhil, D.: Relation among plant growth, carbohydrates and flowering time in the Arabidopsis Landsberg erecta × Kondara recombinant inbred line population. Plant, Cell & Environment 33, 10.1111/j.1365-3040.2010.02155.x, pp. 1369 - 1382 (2010)
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Ibraliu, A.; Dhillon, B.; Faslia, N.; Stich, B.: Variability of essential oil composition in Albanian accessions of Satureja montana L. Journal of Medicinal Plants Research 4, pp. 1359 - 1364 (2010)
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Li, J. Q.; Schulz, B.; Stich, B.: Population structure and genetic diversity in elite sugar beet germplasm investigated with SSR markers. Euphytica 175 (1), pp. 35 - 42 (2010)
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